On Apr 13, 2010, at 8:11 PM, Geoffrey Hutchison wrote:
> Yes. I have no problems with Pybel using the latest development trunk. I have
> not yet tried Andrew's Python script on my Mac, but I can confirm that the
> C++ "babel" command has no problem.
Which Mac OS are you running? I have 10.6 with
[xavier:~/tmp] dalke% gcc --version
i686-apple-darwin10-gcc-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5646) (dot 1)
BTW, I also have no problem with the C++ babel.
[xavier:~/tmp] dalke% echo "C" | babel -ismi - -osdf -
==============================
*** Open Babel Warning in WriteMolecule
No 2D or 3D coordinates exist. Any stereochemical information will be lost.
To generate 2D or 3D coordinates use --gen2D or --gen3d.
OpenBabel04131023042D
1 0 0 0 0 0 0 0 0 0999 V2000
0.0000 0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
M END
$$$$
1 molecule converted
1 warnings 14 audit log messages
Andrew
da...@dalkescientific.com
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