> Are there any development plans to fill this gap in the near future? (for 
> variably large 
> value of 'near'…).

Sure, I don't think it would be terribly difficult. Personally, I'd need to see 
a few of these "commented" Mol2 files to make sure they're being written 
correctly - it's an extension that's not in the mol2 format specification.

-Geoff


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