On 07/08/2012 23:02, Rob Smith wrote: > Does anyone know of a comprehensive list of the OBConversion > OUTOPTIONS characters? I am trying to extend a ruby wrapper we are > developing for openbabel, and I'm having trouble locating the correct > characters to complete the translation of the command line argument > for what I am trying to do: > > obabel benzodiazepine.sdf.gz -O out.svg --filter "title=3016" -s > "c1ccc2c(c1)C(=NCCN2)c3ccccc3 red" -xu -d > > to manipulating and outputting the molecule programmatically for lack > of a list of the OUTOPTIONS characters.
The possible output options depend on the output format. For the svg format in your example they are described in the text from the command obabel -L svg or returned from SVGFormat::Description(). (The GUI parses this text to make checkboxes, etc.) On the command line the single letter output options are precededed by -x, as in -xu in the example. There are also INOPTIONS(with a -a prefix) and GENOPTIONS(--filter, -s and -d above, no prefix) . They all can have parameters separated by spaces which can contain letters, digits and punctuation. Chris ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
