> I'm trying to use the GLMNET classifier with rpy2. Since > pymvpa-0.4.4 does not support rpy2 I have tried to download the latest > sources from the git repository. Unfortunately, it seems that some of > the files are missing (such as nifti.py) and I cannot get the > repository version to work. Am I using a wrong version? Is there a > version of the source beyond 0.4.4 that I can use with rpy2. I'm > running pymvpa on WinXP with Python 2.5 and R 2.7.2. Thanks in > advance.
0.4.4 interfaces glmnet via rpy, not rpy2 which has completely different interface, so just install glmnet and rpy for nifti you would need to install pynifti Altogether I would simply advise to use recommended OS (i.e. Debian, or to be more precise NeuroDebian) in a virtual machine. See http://neuro.debian.net/vm.html for the information ;) So far we heard only positive feedback ;) There you would have everything needed available within a single apt-get install WHATEVER_YOU_NEED_FOR_DOING_YOUR_RESEARCH command ;-) Then it would look smth like http://www.pymvpa.org/files/neurodebian/nd_macos_screenshot_20091123.png on OS X May be we should announce a little contest for the best screenshot. So do not hesitate to share a screen shot of your Windows/OSX/whatever_non_Debian box having NeuroDebian running (FSL/caret/afni/mayavi2/...;) Cheers, -- .-. =------------------------------ /v\ ----------------------------= Keep in touch // \\ (yoh@|www.)onerussian.com Yaroslav Halchenko /( )\ ICQ#: 60653192 Linux User ^^-^^ [175555] _______________________________________________ Pkg-ExpPsy-PyMVPA mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/pkg-exppsy-pymvpa
