The standard tool for taking a disk image is 'dd.' Man page:
http://man7.org/linux/man-pages/man1/dd.1.html

Theoretically, you can simply image the entire drive, partitions and all
intact exactly as they are presently, although I've never done it that
way... I have always imaged partitions directly... But I don't see why
either method would be "wrong," as long as you know how to mount the output
;)

As for compressing it...
https://serverfault.com/questions/52260/compressing-dd-backup-on-the-fly
suggests you can simply pipe the output of 'dd' directly into gzip... But
one of the comments says not to use it for the purposes the original poster
suggested it for, so maybe read their warnings before following their
advice.

On Fri, Jan 4, 2019, 06:08 Richard Owlett <[email protected] wrote:

> I wish to do fresh Debian installs to three machines {including
> repartitioning drives of each machine}. Each drive is nominally 250GB. I
> have purchased a USB connected 1TB drive to be the target.
>
> I like the ease of use of Clonezilla-live. But it intrinsically wipes
> the target drive completely. Compressing the output would be nice.
>
> TIA
>
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