Reviewers: jeffbailey,

Description:
This seems needed due to confusion about dependencies, pthreads, etc.
I'm not entirely familiar with the conventions for these scripts,
though.  Did I do it right?

Please review this at http://codereview.appspot.com/98071

Affected files:
   M     Makefile.am
   M     configure.ac
   A     protobuf-config.in



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