Hello, Ah, I see why now. I did do a full installation, during which the _cmd and sglite extension files, etc. were copied to C:\Python22\Lib\site-packages\pymol. According to comment in C:\Python22\Lib\site.py, a path configuration file must exist in the \site-packages directory indicating which sub-directories are to be appended to sys.path. So I added a file, pymol.pth in \site-packages that contains:
# pymol package configuration pymol Now Python knows where to look for modules. And it works. Thanks so much! Tina ----- Original Message ----- From: "Warren L. DeLano" <war...@delanoscientific.com> To: "'Tina Li'" <t...@bioinformaticssolutions.com>; <pymol-users@lists.sourceforge.net> Sent: Wednesday, August 27, 2003 2:32 PM Subject: RE: [PyMOL] Re: cannot find _cmd module | Tina, | | Did you do a full installation? After running: | | python setup.py build install | python setup2.py | | (in that order) | | pymol.bat should just work. There shouldn't be any need to copy | anything over, nor should you set PYMOL_PATH -- that is all taken care | of automatically with this approach. | | Cheers, | Warren | | | -- | mailto:war...@delanoscientific.com | Warren L. DeLano, Ph.D. | Principal Scientist | DeLano Scientific LLC | Voice (650)-346-1154 | Fax (650)-593-4020 | | > -----Original Message----- | > From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users- | > ad...@lists.sourceforge.net] On Behalf Of Tina Li | > Sent: Wednesday, August 27, 2003 8:34 AM | > To: pymol-users@lists.sourceforge.net | > Subject: [PyMOL] Re: cannot find _cmd module | > | > Hello, | > | > So I figured that in my $PYMOL_PATH\build\lib.win32-2.2\pymol, there | is a | > _cmd.pyd that's missing in $PYMOL_PATH\modules\pymol. I copied it | over, | > and | > PyMOL started up, but said that it failed to import the xray module, | which | > however exists in $PYMOL_PATH\modules\pymol, so I don't understand why | it | > doesn't import that. Anyways, it seems to be up. I guess every time I | > build | > PyMOL, I'll have to copy the _cmd.pyd file over. | > | > Tina | > | > ----- Original Message ----- | > | From: "Tina Li" <t...@bioinformaticssolutions.com> | > | To: <pymol-users@lists.sourceforge.net> | > | Date: Mon, 25 Aug 2003 11:57:27 -0400 | > | Subject: [PyMOL] cannot find _cmd module | > | | > | Hello, | > | | > | Eh, I think this is a rather basic question. So I built PyMOL on | Win32, | > tried | > | to run pymol.bat, which calls python | > $PYMOL_PATH/modules/pymol/__init__.py, | > | which complained: | > | | > | Traceback (most recent call last): | > | File "D:\thli\root\misc\pymol-0.90\modules\pymol\__init__.py", | line | > 92, in | > ? | > | import pymol | > | File "D:\thli\root\misc\pymol-0.90\modules\pymol\__init__.py", | line | > 300, | > in | > | ? | > | import _cmd | > | ImportError: No module named _cmd | > | | > | I have PYTHONPATH set to $PYMOL_PATH/modules. Is it something | obvious | > I'm | > | missing? | > | | > | Thanks much! | > | | > | Tina | > | > | > | > | > ------------------------------------------------------- | > This sf.net email is sponsored by:ThinkGeek | > Welcome to geek heaven. | > http://thinkgeek.com/sf | > _______________________________________________ | > PyMOL-users mailing list | > PyMOL-users@lists.sourceforge.net | > https://lists.sourceforge.net/lists/listinfo/pymol-users |
