Alex,

* Alex Dajkovic <adajk...@kumc.edu> [2005-04-15 10:30] wrote:
> Dear all, 
> 
> I have a structure of a dimer and would like to see the surface at the
> interface of the two proteins.  Is there a way to do this in PyMol?

Say the object has chains A and B:

  create chainA, object & c. a
  create chainB, object & c. b

  show surf, chainA within 4. of chainB
  show surf, chainB within 4. of chainA

Alter the '4.' to suit your tastes.

Cheers,
Rob
-- 
Robert L. Campbell, Ph.D.                         <r...@post.queensu.ca>
Senior Research Associate                            phone: 613-533-6821
Dept. of Biochemistry, Queen's University,             fax: 613-533-2497
Kingston, ON K7L 3N6  Canada       http://adelie.biochem.queensu.ca/~rlc
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