I've been trying to set the sphere_transparency for selections on my
protein, and I've tried the following:
PyMOL> load test.pdb
PyMOL> show spheres, HETATM
I've tried the following to change sphere_transparencies:
PyMOL> set sphere_transparency,0.4,name COO
PyMOL > cmd.set("sphere_transparency", 0.4, selection="name COO")
neither of these work, as the sphere_transparency gets applied to ALL spheres
I know my selection is fine, because I can change the color of this
individual atom by typing:
PyMOL: color red, name COO
Is it possible to change the sphere_transparency setting for individual atoms?
Andrew Wollacott
