Hi Folks, Hoping some kind soul might be able to help me out on a problem that's been stumping me for some time. I'm trying to display a surface colored according to shape complementarity. I create a Grasp surface file for my ligand, use the ccp4 program sc to write shape complementarity values onto this surface, and am now trying to use Pymol to display the surface. I've found (multiple times) examples for coloring a Pymol surface accoring to a Grasp potential map:
load file.pdb, X load potential.phi, pot show surface, X ramp_new e_lvl, pot, [-1.0, 0, -1.0] set surface_color, e_lvl, X But can pymol read in a Grasp SURFACE and color it according to the property values given in the same. Apologies if this is issue has been covered repeatedly, but I haven't been able to track it down. Cheers, Tony Anthony A. Armstrong Department of Biophysics and Biophysical Chemistry Johns Hopkins University School of Medicine 725 North Wolfe Street Baltimore, MD 21205 410-955-8715 410-955-0637 FAX armst...@groucho.med.jhmi.edu
