absolutely, put it on the wiki please On 9/25/07, gilleain torrance <[email protected]> wrote: > Hi, > > On the subject of "circular variance circle plots for dihedral > angles". If we are talking about the same thing, I have implemented > some of this in python if anyone wants it. > > That is, I had to calculate the circular means and std dev for lists > of torsion angles, and used the method described in Allen and Johnson > Acta Cryst. (1991). B47, 62-67. > > If someone wants the code, do ask. > > gilleain > > On 9/25/07, Jurgen F. Doreleijers <[email protected]> wrote: > > Thanks Justin, > > > > The fink install took a long time but worked like a charm. > > I haven't tried Logan's method. > > > > In due time, we might post some python scripts to do similar stuff in > > PyMol. I have to migrate away from molmol at some point;-) > > > > Cheers, > > Jurgen > > BMRB, Madison, WI > > > > On 9/25/07, Justin Schmitz <[email protected]> wrote: > > > Jurgen F. Doreleijers schrieb: > > > > Sorry if it's a bit off topic but I need some Molmol features Pymol > > > > simply hasn't come around to implement yet. Anybody know how to > > > > compile Molmol on the Mac OS X? > > > > > > > There is a packages in the fink database. So you could easily install > > > and compile it via fink. > > > > To satisfy your curiosity, the features list I am interested in: > > > > - regions of matching residues in the way Michael Nilges proposed. > > > > - doing circular variance circle plots for dihedral angles. > > > > - rmsd tables for NMR ensembles, etc. > > > > > > > > It's no big deal I can still do these things displayed thru X11 > > > > remotely running. Just interested. > > > > > > > > Cheers, > > > > > > > > > > > > > ------------------------------------------------------------------------- > > > This SF.net email is sponsored by: Microsoft > > > Defy all challenges. Microsoft(R) Visual Studio 2005. > > > http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ > > > _______________________________________________ > > > PyMOL-users mailing list > > > [email protected] > > > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > > > > > > > -- > > Jurgen F. Doreleijers > > > > ------------------------------------------------------------------------- > > This SF.net email is sponsored by: Microsoft > > Defy all challenges. Microsoft(R) Visual Studio 2005. > > http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ > > _______________________________________________ > > PyMOL-users mailing list > > [email protected] > > https://lists.sourceforge.net/lists/listinfo/pymol-users > > > > ------------------------------------------------------------------------- > This SF.net email is sponsored by: Microsoft > Defy all challenges. Microsoft(R) Visual Studio 2005. > http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ > _______________________________________________ > PyMOL-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/pymol-users >
-- Jurgen F. Doreleijers
