Vitaly,

I just ran your example and I get two separate chains.  What version
of PyMOL are you using?

Cheers,

-- Jason

On Thu, Sep 9, 2010 at 12:16 AM, Vitaly Vostrikov <vvos...@uark.edu> wrote:
> Hello,
>
> I would like to show a CA trace for each of the chains in a dimer. The 
> "cartoon_trace" option works fine for one chain, but then the cartoon 
> continues from the end of chain 1 to the beginning of chain 2. Is there a 
> nicer way? Here is what I use now:
>
> #pdb file contains only CA atoms
> fetch 3b5d
> remove resn p4p
> set cartoon_trace, 1
> show cartoon
>
> Thank you.
> Vitaly
>
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-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

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