Hi Kanika,

No, the spacing, or in this case the lack of it, is correct. The
coordinate section of the pdb file is %8.3f%8.3f%8.3f, i.e. each
coordinate eight characters wide with three decimal precision.

Cheers,

Tsjerk


On Mon, Apr 25, 2011 at 12:28 PM, kanika sharma <ksharma...@gmail.com> wrote:
> i haveĀ attachedĀ a small section of the file after applying the matrix..
> the spacing between x,y and z axis is abnormal



-- 
Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Molecular Dynamics Group
* Groningen Institute for Biomolecular Research and Biotechnology
* Zernike Institute for Advanced Materials
University of Groningen
The Netherlands

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