Hi, I met such issue
Error: 1 <type 'exceptions.IndexError'> Exception in Tk callback Function: <bound method Autodock.generate_receptor of <pmg_tk.startup.autodock.Autodock instance at 0x2c31758>> (type: <type 'instancemethod'>) Args: () Traceback (innermost last): File "/usr/lib/python2.6/dist-packages/Pmw/Pmw_1_3/lib/PmwBase.py", line 1747, in __call__ return apply(self.func, args) File "/usr/local/lib/python2.6/dist-packages/pmg_tk/startup/autodock.py", line 1898, in generate_receptor tmp_rec_pdb = os.path.join(self.work_dir(),"receptor.%s.pdb" % sel[0]) <type 'exceptions.IndexError'>: tuple index out of range There is also something like Batch: prepare_receptor4.py -r /cwd/receptor_1.pdb -o /cwd/receptor..pdbqt -A checkhydrogens sh: prepare_receptor4.py: not found can anyone provide me suggestions? -- Best Regards, lina ------------------------------------------------------------------------------ WhatsUp Gold - Download Free Network Management Software The most intuitive, comprehensive, and cost-effective network management toolset available today. Delivers lowest initial acquisition cost and overall TCO of any competing solution. http://p.sf.net/sfu/whatsupgold-sd _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net