Hi,

I met such issue

Error: 1
<type 'exceptions.IndexError'> Exception in Tk callback
  Function: <bound method Autodock.generate_receptor of
<pmg_tk.startup.autodock.Autodock instance at 0x2c31758>> (type: <type
'instancemethod'>)
  Args: ()
Traceback (innermost last):
  File "/usr/lib/python2.6/dist-packages/Pmw/Pmw_1_3/lib/PmwBase.py",
line 1747, in __call__
    return apply(self.func, args)
  File "/usr/local/lib/python2.6/dist-packages/pmg_tk/startup/autodock.py",
line 1898, in generate_receptor
    tmp_rec_pdb = os.path.join(self.work_dir(),"receptor.%s.pdb" % sel[0])
<type 'exceptions.IndexError'>: tuple index out of range

There is also something like
Batch: prepare_receptor4.py -r /cwd/receptor_1.pdb -o
/cwd/receptor..pdbqt -A checkhydrogens
sh: prepare_receptor4.py: not found

can anyone provide me suggestions?

-- 
Best Regards,

lina

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