Dear Jason, Thanks very much for the prompt reply. Yes, I compiled pymol by hand from source under Linux and I will rebuild it.
Best Regards, Zhijian Xu Jason Vertrees wrote: > Hi Zhijian, > > In PyMOL v1.4 and PyMOL v1.4.1 this message will be emitted. We have > changed this warning message for later versions to be released in a > few months' time. If you're using the open-source code, then a > rebuild from source should fix this for you. I just pushed the change > to the open-source project a few moments ago. > > Cheers, > > -- Jason > > > > On Thu, Jun 16, 2011 at 8:52 AM, zjxu <[email protected]> wrote: > >> Dear everyone, >> when I run a script in pymol1.4.1 on the command line: pymol -rqkc >> script.py. >> Then a lot of messages "ObjectMoleculeGuessValences(1,1): Unreasonable >> connectivity in heteroatom, >> unsuccessful in guessing valences." will be printed out on the screen >> in addition to the script results. >> It is somewhat annoying. Is there any option to turn this off? >> Pymol1.3 works without the above complain messages. >> Thanks in advance. >> >> Zhijian Xu >> >> ------------------------------------------------------------------------------ >> EditLive Enterprise is the world's most technically advanced content >> authoring tool. Experience the power of Track Changes, Inline Image >> Editing and ensure content is compliant with Accessibility Checking. >> http://p.sf.net/sfu/ephox-dev2dev >> _______________________________________________ >> PyMOL-users mailing list ([email protected]) >> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >> Archives: http://www.mail-archive.com/[email protected] >> >> > > > > ------------------------------------------------------------------------------ EditLive Enterprise is the world's most technically advanced content authoring tool. Experience the power of Track Changes, Inline Image Editing and ensure content is compliant with Accessibility Checking. http://p.sf.net/sfu/ephox-dev2dev _______________________________________________ PyMOL-users mailing list ([email protected]) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/[email protected]
