Hi Arne,

Just select the two atoms around the bond and do:

set_bond line_color, marine, (sele)

Use your own color if you don't like marine. If you're showing sticks,
use stick_color instead of line_color.

Cheers,

-- Jason

On Fri, Sep 9, 2011 at 5:44 PM, Arne Dieckmann <adiec...@googlemail.com> wrote:
> Hi all,
>
> I am looking for a command to select and color a single bond in my structure 
> without coloring the corresponding atoms. Any ideas?
>
>
> Cheers,
> Arne
>
>
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-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

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