Hi Jason, 

that did the trick, thank you so much! 


Cheers, 
Arne


On Sep 9, 2011, at 7:56 PM, Jason Vertrees wrote:

> Hi Arne,
> 
> Just select the two atoms around the bond and do:
> 
> set_bond line_color, marine, (sele)
> 
> Use your own color if you don't like marine. If you're showing sticks,
> use stick_color instead of line_color.
> 
> Cheers,
> 
> -- Jason
> 
> On Fri, Sep 9, 2011 at 5:44 PM, Arne Dieckmann <adiec...@googlemail.com> 
> wrote:
>> Hi all,
>> 
>> I am looking for a command to select and color a single bond in my structure 
>> without coloring the corresponding atoms. Any ideas?
>> 
>> 
>> Cheers,
>> Arne
>> 
>> 
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> 
> 
> -- 
> Jason Vertrees, PhD
> PyMOL Product Manager
> Schrodinger, LLC
> 
> (e) jason.vertr...@schrodinger.com
> (o) +1 (603) 374-7120


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