Hi Daniel,

grid_mode is your friend to display different molecules side by side and 
to scale.

set grid_mode, on


Andreas



On 20/10/2011 9:51, Daniel Lundin wrote:
> Hi,
>
> I'm quite new to Pymol, but have searched and found nothing on how to
> visualise and draw a molecule to a certain scale. The reason I want to
> do this is to be able to output figures of several molecules separately
> in a format that displays their relative sizes. I can of course do this
> manually but it's error prone and laborious, so I'd prefer to be able to
> say I want a certain number of angstroms per pixel or so. I will ray
> trace the images.
>
> /Daniel
>

-- 
         Andreas Förster, Research Associate
         Paul Freemont & Xiaodong Zhang Labs
Department of Biochemistry, Imperial College London
             http://www.msf.bio.ic.ac.uk

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