Thanks Andreas, 2011-10-20 11:07, Andreas Förster skrev: > Hi Daniel, > > grid_mode is your friend to display different molecules side by side and > to scale. > > set grid_mode, on > grid_mode looks useful, though I can't understand how to align the structures so that each ends up in the center of its cell. I see in the docs that one should use alignto for this purpose, but I find no documentation on how to call that.
My problem was not so much how to view all structures at once in scale, but rather to output images for each in scale. I suppose I'll have to do this manually with an image editor. > > Andreas > /Daniel > > > On 20/10/2011 9:51, Daniel Lundin wrote: >> Hi, >> >> I'm quite new to Pymol, but have searched and found nothing on how to >> visualise and draw a molecule to a certain scale. The reason I want to >> do this is to be able to output figures of several molecules separately >> in a format that displays their relative sizes. I can of course do this >> manually but it's error prone and laborious, so I'd prefer to be able to >> say I want a certain number of angstroms per pixel or so. I will ray >> trace the images. >> >> /Daniel >> > -- Daniel Lundin, Postdoc SciLifeLab, School of biotechnology, KTH Royal institute of technology, Stockholm, Sweden Postal address: Box 1031 171 21 Solna Sweden Visiting address: Tomtebodavägen 23 A Mobile: +46 (0)708 123 922 Email: daniel.lun...@scilifelab.se ------------------------------------------------------------------------------ The demand for IT networking professionals continues to grow, and the demand for specialized networking skills is growing even more rapidly. Take a complimentary Learning@Ciosco Self-Assessment and learn about Cisco certifications, training, and career opportunities. http://p.sf.net/sfu/cisco-dev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
