Hi Alex, the renumber script only sets the residue number, it does not reorder atoms internally. Just type
PyMOL> sort to sort internally based on the new residue numbers. See also: http://pymolwiki.org/index.php/Sort Cheers, Thomas Alex Truong wrote, On 01/21/13 19:21: > Hi All, > > I've been having a bit of trouble recently with the renumber script. I > have a pdb file that I'm trying to renumber, but unlike the other times > I've used it, it is renumbering incorrectly. The numbers are usually > spaced out 5 residues apart, but I have one number right near the > beginning that is 6 residues down from the previous one. Needless to > say, this is screwing up the rest of the count. Is there any idea why? > I've provided a screenshot. > > Thanks, > Alex -- Thomas Holder PyMOL Developer Schrödinger Contractor ------------------------------------------------------------------------------ Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS, MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current with LearnDevNow - 3,200 step-by-step video tutorials by Microsoft MVPs and experts. SALE $99.99 this month only -- learn more at: http://p.sf.net/sfu/learnmore_122412 _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
