Bob,
Sure, feel free to send those to Thomas.
Cheers,
-- Jason
On Thu, Jun 20, 2013 at 9:06 AM, Robert Hanson <hans...@stolaf.edu> wrote:
> (yes, I meant "forward compatibility" there)
>
> Jason, in our 100+ PyMOL session files that we can now read into Jmol we
> have a few files that don't seem to have backward compatibility to PyMOL
> 1.3 from the open source version 1.6.0.0. Mostly it has to do with CGOs and
> measurements. Should I just send them to you and/or Thomas?
>
> Bob
>
>
>
> On Thu, Jun 20, 2013 at 7:36 AM, Jason Vertrees <
> jason.vertr...@schrodinger.com> wrote:
>
>> Hi David,
>>
>> If you save a session file in the latest version of PyMOL there is never
>> the expectation that prior versions can read that file. Such "forward
>> compatibility" (of the older versions) is not supported. We do support,
>> however, "backward compatibility" which is when newer versions of PyMOL
>> read older session files.
>>
>> Cheers,
>>
>> -- Jason
>>
>>
>> On Wed, Jun 19, 2013 at 4:18 PM, David Hall <li...@cowsandmilk.net>wrote:
>>
>>> I still have this problem:
>>> session saved in 1.6 with a black background; opens in 1.5 (and earlier)
>>> with a red background
>>>
>>> Many of my collaborators use old versions of pymol, frequently installed
>>> onto their machines when they were bought X years ago, and this essentially
>>> makes it so I cannot use pymol 1.6 as I cannot share sessions with them (at
>>> least not without getting weird e-mails asking why I have a sudden affinity
>>> for the color red).
>>>
>>> -David
>>>
>>>
>>>
>>>
>>> On Tue, Jun 18, 2013 at 7:37 AM, Thomas Holder <
>>> thomas.hol...@schrodinger.com> wrote:
>>>
>>>> This is fixed in SVN rev 4032.
>>>>
>>>> Cheers,
>>>> Thomas
>>>>
>>>> Thomas Holder wrote, On 06/15/13 10:45:
>>>> > Hi Rob,
>>>> >
>>>> > this has not been fixed yet, I'm really sorry. We'll look into this
>>>> > ASAP. It only affects the open-source code, apparently we missed
>>>> > something when syncing with the incentive codebase.
>>>> >
>>>> > Cheers,
>>>> > Thomas
>>>> >
>>>> > On Jun 14, 2013, at 9:23 PM, Robert Campbell <
>>>> robert.campb...@queensu.ca> wrote:
>>>> >> Hello Thomas and David,
>>>> >>
>>>> >> Was there any resolution of this? I've just compiled the latest
>>>> version
>>>> >> from SVN and I have the same problem opening files created under
>>>> version
>>>> >> 1.5.0. This is on Debian testing (32-bit).
>>>> >>
>>>> >> Cheers,
>>>> >> Rob
>>>> >>
>>>> >> On Fri, 2013-04-26 19:15 EDT, David Hall <li...@cowsandmilk.net>
>>>> >> wrote:
>>>> >>
>>>> >>> Hi Thomas,
>>>> >>>
>>>> >>> I'm running into issues with color compatibility between 1.6 and
>>>> >>> earlier versions when opening pses
>>>> >>> (a) when I open any 1.5 pse in 1.6, I see a bunch of errors like:
>>>> >>> Setting-Error: type read mismatch (color) 6
>>>> >>> Setting-Error: type read mismatch (color) 663
>>>> >>> Setting-Error: type read mismatch (color) 664
>>>> >>> (b) background color disparity:
>>>> >>> saved in 1.5 with black background; opens in 1.6 with a white
>>>> background
>>>> >>> saved in 1.6 with a blackground; opens in 1.5 (and earlier) with a
>>>> red
>>>> >>> background
>>>> >>>
>>>> >>> These are run on openSUSE 12.3 with SVN rev 4028 . On a side note,
>>>> >>> others who would like to beta test can use devel:languages:python
>>>> repo
>>>> >>> in openSUSE:
>>>> >>>
>>>> https://build.opensuse.org/package/show?package=pymol&project=devel%3Alanguages%3Apython
>>>> >>>
>>>> >>> -David
>>>>
>>>> --
>>>> Thomas Holder
>>>> PyMOL Developer
>>>> Schrödinger Contractor
>>>>
>>>>
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>>>
>>>
>>>
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>>
>>
>>
>> --
>> Jason Vertrees, PhD
>> Director of Core Modeling Products
>> Schrödinger, Inc.
>>
>> (e) jason.vertr...@schrodinger.com
>> (o) +1 (603) 374-7120
>>
>>
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>>
>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
--
Jason Vertrees, PhD
Director of Core Modeling Products
Schrödinger, Inc.
(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120
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