Hi Vincent, we introduced dynamic_measures in PyMOL 1.4, which uses the atom ID and is not robust against duplicated IDs. So the workaround here is to switch dynamic_measures off:
PyMOL> unset dynamic_measures Hope that helps. Cheers, Thomas vincent Chaptal wrote, On 06/20/13 17:09: > Hi, > I've just purchased v1.6 and installed it under MacOS 10.6.8. > I have a problem with using "distance" from a script, as well as via the > wizard. > > my pdb has 12 chains. > when I type: distance d1, molA and chain a and resi 53 and name o, molA > and chain d and resi 8 and name n > the distance is drawn between: chain M and resi 7 and atom cg, and chain > I and resi 53 and atom o. > > I don't understand the error. So I turned to the wizard ->measurement. I > click on the atoms that are in front of me, and the distance is drawn > again between chain M and resi 7 and atom cg, and chain I and resi 53 > and atom o. > For a proof, I'm pasting the top screen where the names of the atoms I > clicked is: > You clicked /molA//A/SER`53/O > Selector: selection "sele" defined with 1 atoms. > You clicked /molA//D/GLY`8/N) > > I was previously under 1.3 and didn't have this problem. > Can you help me? > Vincent -- Thomas Holder PyMOL Developer Schrödinger Contractor ------------------------------------------------------------------------------ This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
