Thanks!

 

Jim

 

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From: Sampson, Jared M. [mailto:jms2...@cumc.columbia.edu] 
Sent: Friday, March 25, 2016 3:03 PM
To: jimkress...@kressworks.org
Cc: pymol-users <pymol-users@lists.sourceforge.net>
Subject: Re: [PyMOL] The Wiki appears outdated or in error

 

Hi Jim -  

 

Here's a patch for Open Source PyMOL (rev4153) that adds the
"collada_background_box" setting (default=0).  If you're using Open Source
PyMOL and are up to applying it and rebuilding, feel free to use it.
Otherwise, I already sent it to Thomas, so hopefully it will be incorporated
into SVN and Incentive PyMOL soon.

 

Cheers,

Jared

 

--

Jared Sampson

Columbia University

 

On Mar 24, 2016, at 2:26 PM, Sampson, Jared M. <jms2...@cumc.columbia.edu
<mailto:jms2...@cumc.columbia.edu> > wrote:

 

Hi Jim -  

 

When I 

 

set geometry_export_mode, 1

 

in PyMOL, then save myfile.dae, then import into MeshLab, MeshLab hangs.

 

I can confirm that this happens for me, too.  I guess maybe Meshlab requires
the camera? 

 

As a workaround, you can go back to the previous version with
collada_geometry_mode=1 and simply delete the box.  You can do this within
Meshlab by using the "Select Connected Components in a region" tool to
select a corner the box, then clicking the "Delete the current set of
selected faces and all the vertices surrounded by that faces" button (see
attached screenshot).  Then, if you zoom in (the box is 100x larger than the
largest dimension of the scene), your scene will be there. 

 

I'm working on a patch right now to exclude the bounding background box from
default COLLADA output and make it optional via a new
`collada_background_box` setting.  

 

Sorry for the confusion, hope this clears it up.

 

Cheers,

Jared

 

--

Jared Sampson

Columbia University

 

 

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