Hi - apologies if this is a duplicate, I had an error sending the
first time and wasn't sure if it made it through.
I have an issue using pandas/HDFStore/pytables in the Anaconda CE
distribution on Windows 64-bit.
After a little troubleshooting with the Anaconda/pandas lists, it's
been suggested that it might be a pytables issue (or at least some
kind of package mismatch causing pytables not to work).
I have a clean install of Anaconda 1.3.1 64-bit CE edition on a
Windows 64-bit machine.
Running the pytables self-test gives the following output:
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
PyTables version: 2.4.0
HDF5 version: 1.8.9
NumPy version: 1.6.2
Numexpr version: 2.0.1 (not using Intel's VML/MKL)
Zlib version: 1.2.3 (in Python interpreter)
Blosc version: 1.1.3 (2010-11-16)
Cython version: 0.17.4
Python version: 2.7.3 |AnacondaCE 1.3.1 (64-bit)| (default, Jan 7
2013, 09:47:12) [MSC v.1500 64 bit (AMD64)]
Byte-ordering: little
Detected cores: 4
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Then I get a *lot* of output to standard error - pages and pages of it
- that looks something like this:
C:\Anaconda\lib\site-packages\tables\filters.py:253: FiltersWarning:
compression library ``bzip2`` is not available; using ``zlib`` instead
% (complib, default_complib), FiltersWarning )
C:\Anaconda\lib\site-packages\tables\filters.py:253: FiltersWarning:
compression library ``lzo`` is not available; using ``zlib`` instead
% (complib, default_complib), FiltersWarning )
HDF5-DIAG: Error detected in HDF5 (1.8.9) thread 0:
#000: ..\..\src\H5A.c line 241 in H5Acreate2(): not a type
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.8.9) thread 0:
#000: ..\..\src\H5A.c line 920 in H5Awrite(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
EHDF5-DIAG: Error detected in HDF5 (1.8.9) thread 0:
#000: ..\..\src\H5A.c line 241 in H5Acreate2(): not a type
major: Invalid arguments to routine
minor: Inappropriate type
Is this something I'm doing wrong or is there something wrong with the package?
Any help would be appreciated.
Thanks,
Jon
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