Hello all,

I would like to recreate the plot shown here (from a useR 2009
presentation):
http://www.agrocampus-ouest.fr/math/useR-2009/abstracts/pdf/Hocking.pdf

I downloaded the code for that image, and discovered that it relies on
external web services, and also having PERL installed on the computer.

I believe this could be done "locally" using the "seqLogo" function/package
(see http://www.bioconductor.org/packages/2.2/bioc/html/seqLogo.html),
combined with the subplot function (from the "TeachingDemos" package).

So my questions are:
1) Might there be other packages/functions that I are more fitting for the
task of recreating this plot ?
2) Can someone give some pointers on how the subplot function could be used
to create such an image ? (I am not sure how to create such a
layout, especially when it needs to be dynamic to the number of cluster
choosen)


Thanks in advance for any help,
Best,
Tal







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