Dear all,

I have problems gettting the following as one graph instead of the two created 
by this script. I know that with this dummy data, the resulting graph will look 
like a catastrophy. I have other data I wish to apply this too. Just wanted to 
supply some dummy data to work with.
There may be unnecessary code below. I am still learning.

Is it possible to do two different bwplots from different dataframes and then 
superpose them on to each other?
with kind regards

A. Zakrisson

mydata<- data.frame(factor1 = factor(rep(LETTERS[1:6], each = 80)), #Dummy data
                    factor2 = factor(rep(c(1:2), each = 16)),
                    var1 = rnorm(120, mean = rep(c(0, 3, 5), each = 40),
                                 sd = rep(c(1, 2, 3), each = 20)))

font.settings <- list( font = 1, cex = 1.3, fontfamily = "serif")

my.theme <- list(
  box.umbrella = list(col = "black"), #Color of deviation lines (95%)
  box.rectangle = list(col="black"),  #Color of the line around the box
  box.dot = list(col = "black", pch = 3, lty=2, lwd=5, cex=1.3),
  plot.symbol   = list(cex = 1, col = 1, pch= 0), #outlier size and color
  par.xlab.text = font.settings,
  mfrow=c(2,2),
  par.ylab.text = font.settings,
  axis.line=list(col="black"), #Set "transparent if no axes
  axis.text = font.settings,
  strip.shingle=list(col=c("white","white")),
  superpose.symbol=list(fill=c("white","white")), # boxplots
  superpose.fill=list(col=c("white","white")),
  superpose.polygon=list(col=c("white","white")), # legend
  par.sub=font.settings)

bgColors <- c("white", "white", "white")
txtColors <- c("black", "black", "black")
myStripStyle <- function(which.panel, factor.levels, par.strip.text,
                         custBgCol=par.strip.text$custBgCol,
                         custTxtCol=par.strip.text$custTxtCol,...) {
  par.settings = list(layout.heights=list(strip=3))
  panel.rect(0, 0, 1, 1,
             col = custBgCol[which.panel],
             border = 1.2)
  panel.text(x = 0.5, y = 0.5,
             font=1,
             fontfamily = "serif",
             cex=1.4,
             lab = factor.levels[which.panel],
             col = custTxtCol[which.panel])
}

bwplot(var1 ~ factor1|factor2, data = mydata,
       groups=factor2,
       box.width = 1/3,    #width of the boxes
       panel=panel.superpose,
       ylab = expression(paste("",delta^{15}, "N")),
       xlab="Station",
       par.settings = my.theme,
       par.strip.text=list(custBgCol=bgColors,
                           custTxtCol=txtColors),
       strip=myStripStyle,
       scales = list(alternating = TRUE,
                     x = list(relation = "same", rot=45),
                     y = list(relation = "same")),
       panel.groups = function(x, y, ..., group.number) {
         panel.bwplot(x + (group.number-1.8)/3, y, ...)
       })
trellis.focus("panel", 1, 1)
panel.abline(h=0, lty=2)  #lwd
trellis.unfocus()
trellis.focus("panel", 2, 1)
panel.abline(h=0, lty=2)  #lwd
trellis.unfocus()


Anna Zakrisson Braeunlich
PhD student

Department of Ecology, Environment and Plant Sciences
Stockholm University
Svante Arrheniusv. 21A
SE-106 91 Stockholm
Sweden/Sverige

Lives in Berlin.
For paper mail:
Katzbachstr. 21
D-10965, Berlin - Kreuzberg
Germany/Deutschland

E-mail: anna.zakris...@su.se
Tel work: +49-(0)3091541281
Mobile: +49-(0)15777374888
LinkedIn: http://se.linkedin.com/pub/anna-zakrisson-braeunlich/33/5a2/51b

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