http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example and http://adv-r.had.co.nz/Reproducibility.html
John Kane Kingston ON Canada > -----Original Message----- > From: lig...@statistik.tu-dortmund.de > Sent: Sat, 23 May 2015 09:36:15 +0200 > To: claire.oq...@uky.edu, r-help@r-project.org > Subject: Re: [R] Stepwise rQTL-unknown warning message and odd QTL curve > > > > On 23.05.2015 01:07, Claire O'Quin wrote: >> Hi There, >> >> I am running a stepwise QTL for a backcross and got the following >> warning >> message: >> >> Warning message: >> In lastout[[i]] - (max(lastout[[i]]) - dropresult[rn == qn[i], 3]) : >> longer object length is not a multiple of shorter object length > > So dimensions of the arguments may not match? >> >> I can not discern what this means. When I created my plot, the QTL curve >> on >> chromosome 3 is very odd (tried attaching it), so I suspect that the >> warning is connected to that odd curve plot. >> >> I tried running the fitqtl just to see what would happen and got an >> error >> (Error in solve.default(t(Z) %*% Z, t(Z) %*% X) : system is >> computationally >> singular: reciprocal condition number = 1.49755e-24). >> >> Any thoughts about what is going on? > > No, without knoing what the arguments and the actual code was. > > Best, > Uwe Ligges > >> >> Thank you, >> Claire >> >> >> >> ----------------------------------- >> Claire O'Quin, PhD >> Postdoctoral Research Scholar >> University of Kentucky >> http://www.linnenlab.com/home.html >> >> >> >> ______________________________________________ >> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> > > ______________________________________________ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. ____________________________________________________________ FREE 3D EARTH SCREENSAVER - Watch the Earth right on your desktop! ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.