I think the default now is to not save them unless you set the fig.path chunk 
option.

http://kbroman.org/knitr_knutshell/pages/Rmarkdown.html
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Sent from my phone. Please excuse my brevity.

On October 21, 2015 1:47:33 PM GMT+02:00, Bob O'Hara <rni....@gmail.com> wrote:
>The figures should be saved somewhere. e.g. if you have x.Rmd, you
>should have a X_files/ folder with subfolders for the figures (e.g.
>X-html or X-latex). At least that's what I have.
>
>Bob
>
>On 20 October 2015 at 18:18, Witold E Wolski <wewol...@gmail.com>
>wrote:
>> I am running r-markdown from r-studio and can't work out how to keep
>> the figures.
>> I mean I have a few figures in the document and would like to have
>> them as separate pdf's too as I have been used to have them when
>using
>> Sweave.
>>
>>
>>
>> best regards
>> Witold
>>
>>
>> --
>> Witold Eryk Wolski
>>
>> ______________________________________________
>> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
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>> PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.

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