I installed GSView and the file opens correctly and the output is as is should be. As you suggest, this must be a bug in Adobe CS2 Illustrator and Photoshop.
Thanks for your help. Mark Mark W. Kimpel MD (317) 490-5129 Work, & Mobile (317) 663-0513 Home (no voice mail please) 1-(317)-536-2730 FAX -----Original Message----- From: Duncan Murdoch [mailto:[EMAIL PROTECTED] Sent: Thursday, August 31, 2006 4:27 PM To: Kimpel, Mark William Cc: [EMAIL PROTECTED]; r-help@stat.math.ethz.ch Subject: Re: [R] problem with postscript output of R-devel on Windows On 8/31/2006 3:51 PM, Kimpel, Mark William wrote: > I apologize for my previous confusing example. Below is some sample > code, taken directly from the "image" help file, that reproduces a > postscript problem. This now happens with both R 2.3.1 and R 2.4 > > What I get appears to be output of only certain postscript "objects", to > use an Adobe term. When I use the R GUI menu to "save as", jpeg and pdf > files save correctly, but the postscript file does not. I am not getting > any axis labels or topo labels. This is true whether I import the PS > file into either Photoshop or Illustrator. I don't see a problem using GSView. Maybe this is an Adobe bug? Duncan > > Thanks, Mark > > x <- 10*(1:nrow(volcano)) > y <- 10*(1:ncol(volcano)) > image(x, y, volcano, col = terrain.colors(100), axes = FALSE) > contour(x, y, volcano, levels = seq(90, 200, by = 5), > add = TRUE, col = "peru") > axis(1, at = seq(100, 800, by = 100)) > axis(2, at = seq(100, 600, by = 100)) > box() > title(main = "Maunga Whau Volcano", font.main = 4) > >> sessionInfo() > Version 2.3.1 (2006-06-01) > i386-pc-mingw32 > > attached base packages: > [1] "methods" "stats" "graphics" "grDevices" "utils" > "datasets" > [7] "base" > > Mark W. Kimpel MD > > > > (317) 490-5129 Work, & Mobile > > > > (317) 663-0513 Home (no voice mail please) > > 1-(317)-536-2730 FAX > > > -----Original Message----- > From: Duncan Murdoch [mailto:[EMAIL PROTECTED] > Sent: Thursday, August 31, 2006 12:52 PM > To: Kimpel, Mark William > Cc: r-help@stat.math.ethz.ch > Subject: Re: [R] problem with postscript output of R-devel on Windows > > On 8/31/2006 11:27 AM, Kimpel, Mark William wrote: >> I have developed a problem with the postscript output of plot on > Windows. My code still works properly with R 2.3 but, with R 2.4, the > white text on red background does not show up. It does, however, show up > when output is sent to the screen. Below is my code and sessionInfo. >> >> R version 2.4.0 Under development (unstable) (2006-08-29 r39012) >> i386-pc-mingw32 >> >> locale: >> LC_COLLATE=English_United States.1252;LC_CTYPE=English_United > States.1252;LC_MONETARY=English_United > States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252 >> >> attached base packages: >> [1] "splines" "tools" "methods" "stats" "graphics" > "grDevices" "utils" "datasets" >> [9] "base" >> >> other attached packages: >> Rgraphviz geneplotter XML GOstats Category > hgu95av2 KEGG multtest xtable >> "1.11.9" "1.11.8" "0.99-8" "1.6.0" "1.4.1" > "1.12.0" "1.8.1" "1.11.2" "1.3-2" >> RBGL annotate GO graph Ruuid > limma genefilter survival rat2302 >> "1.8.1" "1.11.5" "1.6.5" "1.11.13" "1.11.2" > "2.7.9" "1.11.8" "2.28" "1.12.0" >> affy affyio Biobase >> "1.11.6" "1.1.8" "1.11.29" >> >> >> fileName<-paste(experiment, contrast, "FDR", FDR, "Graph", "ps", > sep=".") >> postscript(file=fileName, paper="special",width=width, > height=height) #set up graphics device >> plot(result.gN, layout.param, nodeAttrs = nAttrs, edgeAttrs = > eAttrs, >> main=paste(paste("Experiment:", experiment, "; Contrast:", > contrast,"; FDR:", FDR, sep=""), paste("Min. connections ==", > min.edges, "Min. citations per connection ==", min.cites, "Additional > search criteria:", >> termAdditional, sep=" "), sep=" ")) > > > Could you put together a reproducible example to illustrate the problem? > > We don't have all the variables used in that example. I think you > should be able to do it with just base packages attached; if not, it's > likely a problem with one of the contributed packages, rather than with > R. > > Duncan Murdoch > > ______________________________________________ > R-help@stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. ______________________________________________ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
