To present a contrary view...

To me the commentary so far doesn't seem right -- if I were writing an academic 
paper (I personally think this is a good analogy for many R packages) and 
elaborating on the ideas of someone else, I would cite their work but I would 
not add them as an author to my paper. I would not expect the authors of cited 
work to agree with or take responsibility for my work, which is what authorship 
(in the publication domain) implies. In the current case there is no reason to 
think that the author of matlab code would be informed about or willing to 
vouch for the R implementation. Minimally, in an academic setting I would (be 
required to) ask whether the individual wished to be an author. 

Conversely, if an author were to have made a substantive contribution to my 
package, and objected to the content of the package with their name on it, I 
would feel obliged to respect their wishes and, e.g., withdraw or, if permitted 
by licensing, revise or re-publish the paper / package without the author. This 
makes me think carefully about who actually contributed to the package, rather 
than merely whose prior work my package builds upon.

Of course it is necessary to obey licensing terms of the prior work, and 
important to acknowledge, above and beyond the specific licensing terms, the 
contributions individuals make.

Martin Morgan

On 6/2/20, 5:57 AM, "R-package-devel on behalf of Adelchi Azzalini" 
<r-package-devel-boun...@r-project.org on behalf of azzal...@stat.unipd.it> 
wrote:

    The point in question does not refer to copying code, but to code 
translation.
    Does this make any difference? 
    This was the question which I raised.

    The phrase "As the code is part of the package now," does not seem to apply 
in this case,
    since the code is actually not there.

    Also, if the authors of the original code (in Matlab) must be included in 
the Authors@R 
    block of the DESCRIPTION file, should they be labelled as "aut", "cbt", or 
what?

    Apart from the specific instance  which my earlier question was referring 
to,
    the view "As the code is part of the package now, therese are of course now 
also copyright 
    holders and authors of your package" opens another question, closely 
related but different,
    as it refers to code which is included, not translated. 
    The above-quoted sentence appears to say that anyone who has written any
    portion of code is an author of the package. In this view, who must be 
labelled "cbt" then?

    Best regards

    Adelchi


    > On 2 Jun 2020, at 01:25, Uwe Ligges <lig...@statistik.tu-dortmund.de> 
wrote:
    > 
    > If you copy code, you have to make sure that you can use it under the 
currrent license of your package, and you have to make sure to declare copright 
holders and authors. As the code is part of the package now, therese are of 
course now also copyright holders and authors of your package.
    > 
    > Best,
    > Uwe Ligges
    > 
    > On 01.06.2020 23:37, R. Mark Sharp wrote:
    >> Adelchi,
    >> I have a similar situation where I had made all of the typical academic 
references within the code and documentation for a small but important function 
my package uses. I was asked by the CRAN reviewers to add the author of that 
function to the DESCRIPTION Authors@R section. I added the following:
    >> person("Terry", "Therneau", role = c("aut”))
    >> Mark
    >> R. Mark Sharp, Ph.D.
    >> Data Scientist and Biomedical Statistical Consultant
    >> 7526 Meadow Green St.
    >> San Antonio, TX 78251
    >> mobile: 210-218-2868
    >> rmsh...@me.com
    >>> Begin forwarded message:
    >>> 
    >>> From: Adelchi Azzalini <azzal...@stat.unipd.it>
    >>> Subject: [R] a question of etiquette
    >>> Date: June 1, 2020 at 11:34:00 AM CDT
    >>> To: r-h...@r-project.org
    >>> 
    >>> The new version of a package which I maintain will include a new 
function which I have ported to R from Matlab.
    >>> The documentation of this R function indicates the authors of the 
original Matlab code, reference to their paper, URL of the source code.
    >>> 
    >>> Question: is this adequate, or should I include them as co-authors of 
the package, or as contributors, or what else?
    >>> Is there a general policy about this matter?
    >>> 
    >>> Adelchi Azzalini
    >>> http://azzalini.stat.unipd.it/
    >>> 
    >>> ______________________________________________
    >>> r-h...@r-project.org mailing list -- To UNSUBSCRIBE and more, see
    >>> https://stat.ethz.ch/mailman/listinfo/r-help
    >>> PLEASE do read the posting guide 
http://www.R-project.org/posting-guide.html
    >>> and provide commented, minimal, self-contained, reproducible code.
    >>  [[alternative HTML version deleted]]
    >> ______________________________________________
    >> R-package-devel@r-project.org mailing list
    >> https://stat.ethz.ch/mailman/listinfo/r-package-devel

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