I'm trying to compile R 2.9.0 from source on a MacBookPro (1.83 GHz Intel Core Duo, latest system software). I'm using the gfortran version from the R 2.9.0 GUI binary image and the following:

configure --disable-nls --with-aqua=no --enable-R-framework=no --with- x=no
make

This worked fine with R-2.8.1 but fails with the current version (see below). Using configure with defaults gives the same result. I have fink installed. Renaming /sw did not fix things either but resulted in a different failure (?). I don't know whether this is specific to my machine. I wondering whether there are any known conflicts with fink packages? Am I missing something obvious? Any pointers how to fix this would be much appreciated.

Martin


Martin Renner                                   
current address:
Alaska Maritime NWR
Homer, AK 99603, USA






R is now configured for i386-apple-darwin9.6.0

  Source directory:          /Users/martin/src/R-2.9.0
  Installation directory:    /usr/local

  C compiler:                gcc -std=gnu99  -g -O2
  Fortran 77 compiler:       gfortran  -g -O2

  C++ compiler:              g++  -g -O2
  Fortran 90/95 compiler:    gfortran -g -O2
  Obj-C compiler:            gcc -g -O2

  Interfaces supported:      tcltk
  External libraries:        readline
  Additional capabilities:   PNG, JPEG, TIFF, iconv, cairo, ICU
  Options enabled:           shared BLAS, Java

  Recommended packages:      yes


[snip...]

gcc -std=gnu99 -I/Users/martin/src/R-2.9.0/src/extra/zlib -I/Users/ martin/src/R-2.9.0/src/extra/bzip2 -I/Users/martin/src/R-2.9.0/src/ extra/pcre -I. -I../../src/include -I/Users/martin/src/R-2.9.0/src/ include -I/sw/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 - c /Users/martin/src/R-2.9.0/src/main/attrib.c -o attrib.o
/Users/martin/src/R-2.9.0/src/main/attrib.c: In function ‘do_class’:
/Users/martin/src/R-2.9.0/src/main/attrib.c:531: warning: implicit declaration of function ‘S3Class’ /Users/martin/src/R-2.9.0/src/main/attrib.c:531: warning: assignment makes pointer from integer without a cast
/Users/martin/src/R-2.9.0/src/main/attrib.c: At top level:
/Users/martin/src/R-2.9.0/src/main/attrib.c:616: error: conflicting types for ‘S3Class’ /Users/martin/src/R-2.9.0/src/main/attrib.c:531: error: previous implicit declaration of ‘S3Class’ was here /Users/martin/src/R-2.9.0/src/main/attrib.c: In function ‘dimnamesgets1’: /Users/martin/src/R-2.9.0/src/main/attrib.c:854: warning: implicit declaration of function ‘asCharacterFactor’ /Users/martin/src/R-2.9.0/src/main/attrib.c:854: warning: return makes pointer from integer without a cast
make[3]: *** [attrib.o] Error 1
make[3]: *** Waiting for unfinished jobs....
make[2]: *** [R] Error 2
make[1]: *** [R] Error 1
make: *** [R] Error 1


and without fink:

making util.d from /Users/martin/src/R-2.9.0/src/main/util.c
/Users/martin/src/R-2.9.0/src/main/util.c:1572:28: error: unicode/ utypes.h: No such file or directory /Users/martin/src/R-2.9.0/src/main/util.c:1573:26: error: unicode/ ucol.h: No such file or directory /Users/martin/src/R-2.9.0/src/main/util.c:1574:26: error: unicode/ uloc.h: No such file or directory /Users/martin/src/R-2.9.0/src/main/util.c:1575:27: error: unicode/ uiter.h: No such file or directory
make[3]: *** [util.d] Error 1
make[2]: *** [R] Error 2
make[1]: *** [R] Error 1
make: *** [R] Error 1

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