Hello All, I have some large code that simulates gene trees from species trees and I need to automate the production of chronograms in R. I have used the "chronopl" function in Ape and can automate that just fine. However, I am at a loss as to how to get the cross validation procedure for estimating the proper lambda to work in that function. Any help would be appreciated. Also, does there exist a Bayesian relaxed clock (or relaxed phylogenetics) method available in R?
Thanks! Frank -- ************************************* *Frank T. Burbrink, Ph.D.* *Professor* *Biology Department* *6S-143* *2800 Victory Blvd.* *College of Staten Island/CUNY* *Staten Island, New York 10314* *E-Mail:frank.burbr...@csi.cuny.edu* *Phone:718-982-3961* *Web Page: http://scholar.library.csi.cuny.edu/~fburbrink/* ************************************* *Chair * *Ecology, Evolutionary Biology, and Behavior* *Doctoral Subprogram* *Biology Program* *City University of New York * *Graduate Center* *365 Fifth Avenue* *New York, NY 10016-4309* ************************************ [[alternative HTML version deleted]] _______________________________________________ R-sig-phylo mailing list R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
