Dear Emmanuel, Thanks a lot! This 'type' option seems to be somewhat hidden... Hopefully this helps also others.
Best, Vladimir 2013/5/15 Emmanuel Paradis <emmanuel.para...@ird.fr>: > Hi Vladimir, > > Have a closer look at the help page of anova.gls: there is a 'type' option to > do what you want. > > Best, > > Emmanuel > -----Original Message----- > From: Vladimír Remeš <vlad.re...@gmail.com> > Sender: r-sig-phylo-boun...@r-project.org > Date: Wed, 15 May 2013 09:09:33 > To: <r-sig-phylo@r-project.org> > Subject: [R-sig-phylo] adjusted SS in pgls > > Dear list, > > I would like to obtain adjusted Sums of Squares, e.g. like those > produced by Anova (car package) (vs. anova, which produces sequential > SS). > > I found out that both gls (nlme) and pgls (caper) produce only > sequential SS for their F-tests and Anova doesn't work on objects > produced by gls or pgls. > > I know that I can use t-tests of individual predictors, but for > factors with more than 2 levels, this produces tests of individual > levels, not of the factor itself. > > Any help much appreciated. > Best regards, > Vladimir > > ***************************** > Vladimir Remes > Dept of Zoology and Lab of Ornithology > Palacky University > 17. listopadu 50 > 77146 Olomouc > Czech Republic > > www.zoologie.upol.cz/remes > > _______________________________________________ > R-sig-phylo mailing list - R-sig-phylo@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-phylo > Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/ _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
