Dear Greg,
Leaving cycle/non-cycle atoms aside let's try to figure out how to reduce
the number of maps allowing only 1 overlap between matches:
Can you please suggest the best approach to do that?
Example:
vMatches:
[0] [5]((0,1),(1,2),(2,3),(3,4),(4,5))
[1] [5]((0,1),(1,2),(2,3),(3,8),(4,7))
[2] [5]((0,2),(1,3),(2,4),(3,5),(4,6))
[3] [5]((0,2),(1,3),(2,8),(3,7),(4,6))
[4] [5]((0,3),(1,4),(2,5),(3,6),(4,7))
[5] [5]((0,3),(1,8),(2,7),(3,6),(4,5))
[6] [5]((0,4),(1,3),(2,8),(3,7),(4,6))
[7] [5]((0,4),(1,5),(2,6),(3,7),(4,8))
[8] [5]((0,5),(1,4),(2,3),(3,8),(4,7))
[9] [5]((0,6),(1,5),(2,4),(3,3),(4,8))
[10] [5]((0,9),(1,1),(2,2),(3,3),(4,4))
[11] [5]((0,9),(1,1),(2,2),(3,3),(4,8))
[12] [5]((0,9),(1,10),(2,11),(3,12),(4,13))
[13] [5]((0,9),(1,10),(2,11),(3,12),(4,18))
[14] [5]((0,9),(1,19),(2,18),(3,12),(4,11))
[15] [5]((0,9),(1,19),(2,18),(3,12),(4,13))
[16] [5]((0,10),(1,11),(2,12),(3,18),(4,19))
I need actually to get finally for this example:
[1] [5]((0,1),(1,2),(2,3),(3,8),(4,7))
[12] [5]((0,9),(1,10),(2,11),(3,12),(4,13))
in all other matches overlap is over 1.
Regards,
Evgueni
2009/12/1 Evgueni Kolossov <ekolos...@gmail.com>
> >I will repeat myself: please provide a specific match that you
> >consider to be wrong.
> I can investigate if it make sense
>
>
> >Comments like this do not improve my motivation to continue to be helpful.
> I am sorry - I have no intention to offend you. I just cannot understand
> the purpose of this function with current limitations
>
> Regards,
> Evgueni
>
> 2009/12/1 Greg Landrum <greg.land...@gmail.com>
>
>> On Tue, Dec 1, 2009 at 12:31 PM, Evgueni Kolossov <ekolos...@gmail.com>
>> wrote:
>>
>> > I can investigate but even without this cyclic/non-cyclic problem there
>> > cannot be 17 matches! Especially with uniquify set to true.
>>
>> I will repeat myself: please provide a specific match that you
>> consider to be wrong.
>>
>> > So, this function is actually useless.
>>
>> Comments like this do not improve my motivation to continue to be helpful.
>>
>> -greg
>>
>
>
>
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