Believe me, I restarted it many times :)
On Tue, Sep 10, 2013 at 10:06 PM, Igor Filippov
<igor.v.filip...@gmail.com>wrote:
> Maybe move the rdkit libs into some folder within apache DocumentRoot?
> Did you restart apache after syncing the libraries?
>
>
> On Tue, Sep 10, 2013 at 3:58 PM, Michał Nowotka <mmm...@gmail.com> wrote:
>
>> Yes, I mean even RDKit.
>>
>> No, the trouble maker has exactly the same system. The only difference is
>> that in order to install my app on other machines I was using fabric and on
>> the problematic machines I just rsynced directories from working machines.
>>
>> The only error in error_log is:
>>
>> ImportError: libRDGeneral.so.1: cannot open shared object file: No such file
>> or directory
>>
>>
>>
>>
>> On Tue, Sep 10, 2013 at 9:47 PM, Markus Sitzmann
>> <sitzm...@helix.nih.gov>wrote:
>>
>>> **
>>> So you mean, you have even RDKit running with this setup on other
>>> machines
>>> or just the other libraries.
>>>
>>> If "other machines" vs the trouble maker machine includes a change from
>>> RH5
>>> to RH6 than indeed I would suspect SELinux as Igor suggested. Don't ask
>>> me
>>> for a solution except for switching it off.
>>>
>>> Is there anything (else) in /var/log/httpd/error_log?
>>>
>>> Markus
>>>
>>> On Tue, 10 Sep 2013 15:36:27 -0400, Michał Nowotka <mmm...@gmail.com>
>>> wrote:
>>>
>>> Yes, I can. What is more important I successfully managed to run other
>>> libraries with extensions in C (indigo toolkit, cx_Oracle). What is even
>>> more important the same configuration (at least it seems to be the same)
>>> works on other machines. Unfortunately I don't know how to debug to find
>>> source of my problems....
>>>
>>>
>>> On Tue, Sep 10, 2013 at 9:32 PM, Markus Sitzmann <sitzm...@helix.nih.gov
>>> > wrote:
>>>
>>>> How far is your setup working so far? Can you already run python scripts
>>>> via mod_wsgi without importing rdkit?
>>>>
>>>>
>>>>
>>>>
>>>> On Tue, 10 Sep 2013 15:29:07 -0400, Michał Nowotka <mmm...@gmail.com>
>>>> wrote:
>>>>
>>>> Yes: python, mod_wsgi, vitualenv, RHEL
>>>>
>>>>
>>>> On Tue, Sep 10, 2013 at 9:22 PM, Markus Sitzmann <
>>>> sitzm...@helix.nih.gov> wrote:
>>>>
>>>>> Are you trying to use it with python/mod_wsgi? Your description so far
>>>>> is a bit vague :-)
>>>>>
>>>>> Markus
>>>>>
>>>>> On Tue, 10 Sep 2013 15:00:55 -0400, Michał Nowotka <mmm...@gmail.com>
>>>>> wrote:
>>>>>
>>>>> Thanks for advices. Unfortunately I can't do anything system-wide as I
>>>>> don't have administrator privileges on the server. Than also means I can't
>>>>> switch selinux.
>>>>>
>>>>>
>>>>> On Tue, Sep 10, 2013 at 7:59 PM, Igor Filippov <
>>>>> igor.v.filip...@gmail.com> wrote:
>>>>>
>>>>>> Some kind of an answer seems to be already given at Stackoverflow.
>>>>>> I would add two comments:
>>>>>> 1) Unless there are some specific problems with this you can add new
>>>>>> library system-wide through ld.so.conf
>>>>>> 2) You did not mention what your log files say but I would experiment
>>>>>> with Selinux switched off.
>>>>>>
>>>>>>
>>>>>>
>>>>>> On Tue, Sep 10, 2013 at 1:51 PM, Michał Nowotka <mmm...@gmail.com>wrote:
>>>>>>
>>>>>>> I have some problems with configuring apache to use rdkit, this is
>>>>>>> described in SO question:
>>>>>>>
>>>>>>>
>>>>>>> http://stackoverflow.com/questions/2550504/setting-ld-library-path-in-apache-passenv-setenv-still-cant-find-library
>>>>>>>
>>>>>>> Any help would be appreciated!
>>>>>>>
>>>>>>> Regards,
>>>>>>> Michał Nowotka
>>>>>>>
>>>>>>>
>>>>>>> ------------------------------------------------------------------------------
>>>>>>> How ServiceNow helps IT people transform IT departments:
>>>>>>> 1. Consolidate legacy IT systems to a single system of record for IT
>>>>>>> 2. Standardize and globalize service processes across IT
>>>>>>> 3. Implement zero-touch automation to replace manual, redundant tasks
>>>>>>>
>>>>>>> http://pubads.g.doubleclick.net/gampad/clk?id=51271111&iu=/4140/ostg.clktrk
>>>>>>> _______________________________________________
>>>>>>> Rdkit-discuss mailing list
>>>>>>> Rdkit-discuss@lists.sourceforge.net
>>>>>>> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>
>>>>
>>>>
>>>>
>>>
>>>
>>>
>>>
>>
>>
>> ------------------------------------------------------------------------------
>> How ServiceNow helps IT people transform IT departments:
>> 1. Consolidate legacy IT systems to a single system of record for IT
>> 2. Standardize and globalize service processes across IT
>> 3. Implement zero-touch automation to replace manual, redundant tasks
>>
>> http://pubads.g.doubleclick.net/gampad/clk?id=51271111&iu=/4140/ostg.clktrk
>> _______________________________________________
>> Rdkit-discuss mailing list
>> Rdkit-discuss@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
>>
>>
>
------------------------------------------------------------------------------
How ServiceNow helps IT people transform IT departments:
1. Consolidate legacy IT systems to a single system of record for IT
2. Standardize and globalize service processes across IT
3. Implement zero-touch automation to replace manual, redundant tasks
http://pubads.g.doubleclick.net/gampad/clk?id=51271111&iu=/4140/ostg.clktrk
_______________________________________________
Rdkit-discuss mailing list
Rdkit-discuss@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
