Hi Tim,
That should be handled all the time in the new version.
The check in the code is here:
https://github.com/rdkit/rdkit/blob/master/Code/GraphMol/FileParsers/MolFileParser.cpp#L1105
and that's not part of the strictParsing coverage.
Are you sure you're using the 2016.03 release (or something built from
github master)?
On Mon, Apr 25, 2016 at 6:46 PM, Tim Dudgeon <tdudgeon...@gmail.com> wrote:
> I've got molfiles that have element labels all in upper case (e.g. CL
> instead of Cl).
> Parsing these fails (Element 'CL' not found).
> I notice that in the C++ and Python APIs there is a 'strictParsing'
> option that I'm hoping makes RDKit tolerant of this, but this option
> does not seem to be present in the Java API, and guess, what, that's the
> one I'm using!
> Is this possible from Java?
>
> Tim
>
>
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