Github user dbtsai commented on a diff in the pull request:

    https://github.com/apache/spark/pull/13796#discussion_r74889972
  
    --- Diff: 
mllib/src/main/scala/org/apache/spark/ml/classification/LogisticRegression.scala
 ---
    @@ -952,13 +963,160 @@ private class LogisticAggregator(
         val bcFeaturesStd: Broadcast[Array[Double]],
         private val numFeatures: Int,
         numClasses: Int,
    -    fitIntercept: Boolean) extends Serializable {
    +    fitIntercept: Boolean,
    +    multinomial: Boolean) extends Serializable with Logging {
    +
    +  private val numFeaturesPlusIntercept = if (fitIntercept) numFeatures + 1 
else numFeatures
    +  private val coefficientSize = bcCoefficients.value.size
    +  if (multinomial) {
    +    require(numClasses ==  coefficientSize / numFeaturesPlusIntercept, 
s"The number of " +
    +      s"coefficients should be ${numClasses * numFeaturesPlusIntercept} 
but was $coefficientSize")
    +  } else {
    +    require(coefficientSize == numFeaturesPlusIntercept, s"Expected 
$numFeaturesPlusIntercept " +
    +      s"coefficients but got $coefficientSize")
    +    require(numClasses <= 2, s"Binary logistic aggregator requires 
numClasses in {1, 2}" +
    +      s" but found $numClasses.")
    +  }
     
       private var weightSum = 0.0
       private var lossSum = 0.0
     
    -  private val gradientSumArray =
    -    Array.ofDim[Double](if (fitIntercept) numFeatures + 1 else numFeatures)
    +  private val totalCoefficientLength = {
    +    val cols = if (fitIntercept) numFeatures + 1 else numFeatures
    +    val rows = if (multinomial) numClasses else 1
    +    rows * cols
    +  }
    +
    +  private val gradientSumArray = 
Array.ofDim[Double](totalCoefficientLength)
    +
    +  if (multinomial && numClasses < 2) {
    +    logInfo(s"Multinomial logistic regression for binary classification 
yields separate " +
    +      s"coefficients for positive and negative classes. When no 
regularization is applied, the" +
    +      s"result will be effectively the same as binary logistic regression. 
When regularization" +
    +      s"is applied, multinomial loss will produce a result different from 
binary loss.")
    +  }
    +
    +  /** Update gradient and loss using binary loss function. */
    +  private def binaryUpdateInPlace(
    +      features: Vector,
    +      weight: Double,
    +      label: Double,
    +      coefficients: Array[Double],
    +      gradient: Array[Double],
    +      featuresStd: Array[Double],
    +      numFeaturesPlusIntercept: Int): Unit = {
    +    val margin = - {
    +      var sum = 0.0
    +      features.foreachActive { (index, value) =>
    +        if (featuresStd(index) != 0.0 && value != 0.0) {
    +          sum += coefficients(index) * value / featuresStd(index)
    +        }
    +      }
    +      sum + {
    +        if (fitIntercept) coefficients(numFeaturesPlusIntercept - 1) else 
0.0
    +      }
    +    }
    +
    +    val multiplier = weight * (1.0 / (1.0 + math.exp(margin)) - label)
    +
    +    features.foreachActive { (index, value) =>
    +      if (featuresStd(index) != 0.0 && value != 0.0) {
    +        gradient(index) += multiplier * value / featuresStd(index)
    +      }
    +    }
    +
    +    if (fitIntercept) {
    +      gradient(numFeaturesPlusIntercept - 1) += multiplier
    +    }
    +
    +    if (label > 0) {
    +      // The following is equivalent to log(1 + exp(margin)) but more 
numerically stable.
    +      lossSum += weight * MLUtils.log1pExp(margin)
    +    } else {
    +      lossSum += weight * (MLUtils.log1pExp(margin) - margin)
    +    }
    +  }
    +
    +  /** Update gradient and loss using multinomial (softmax) loss function. 
*/
    +  private def multinomialUpdateInPlace(
    +      features: Vector,
    +      weight: Double,
    +      label: Double,
    +      coefficients: Array[Double],
    +      gradient: Array[Double],
    +      featuresStd: Array[Double],
    +      numFeaturesPlusIntercept: Int): Unit = {
    +    // TODO: use level 2 BLAS operations
    +    /*
    +      Note: this can still be used when numClasses = 2 for binary
    +      logistic regression without pivoting.
    +     */
    +
    +    // marginOfLabel is margins(label) in the formula
    +    var marginOfLabel = 0.0
    +    var maxMargin = Double.NegativeInfinity
    +
    +    val margins = Array.tabulate(numClasses) { i =>
    +      var margin = 0.0
    +      features.foreachActive { (index, value) =>
    +        if (featuresStd(index) != 0.0 && value != 0.0) {
    +          margin += coefficients(i * numFeaturesPlusIntercept + index) * 
value / featuresStd(index)
    +        }
    +      }
    +
    +      if (fitIntercept) {
    +        margin += coefficients(i * numFeaturesPlusIntercept + 
features.size)
    +      }
    +      if (i == label.toInt) marginOfLabel = margin
    +      if (margin > maxMargin) {
    +        maxMargin = margin
    +      }
    +      margin
    +    }
    +
    +    /**
    +     * When maxMargin > 0, the original formula could cause overflow.
    +     * We address this by subtracting maxMargin from all the margins, so 
it's guaranteed
    +     * that all of the new margins will be smaller than zero to prevent 
arithmetic overflow.
    +     */
    +    val sum = {
    +      var temp = 0.0
    +      if (maxMargin > 0) {
    +        for (i <- 0 until numClasses) {
    +          margins(i) -= maxMargin
    +          temp += math.exp(margins(i))
    +        }
    +      } else {
    +        for (i <- 0 until numClasses) {
    +          temp += math.exp(margins(i))
    +        }
    +      }
    +      temp
    +    }
    +
    +    for (i <- 0 until numClasses) {
    +      val multiplier = math.exp(margins(i)) / sum - {
    +        if (label == i) 1.0 else 0.0
    +      }
    +      features.foreachActive { (index, value) =>
    --- End diff --
    
    Consider to move `for (i <- 0 until numClasses)` into the `if statement` 
inside `foreachActive` with `while loop`.


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