Github user mengxr commented on a diff in the pull request:

    https://github.com/apache/spark/pull/4109#discussion_r23268073
  
    --- Diff: mllib/src/main/scala/org/apache/spark/mllib/linalg/BLAS.scala ---
    @@ -317,19 +317,23 @@ private[spark] object BLAS extends Serializable with 
Logging {
           B: DenseMatrix,
           beta: Double,
           C: DenseMatrix): Unit = {
    +    val transModA = transA ^ A.isTransposed
    --- End diff --
    
    If we set the transpose flag in matrix, maybe we should remove the `transA` 
and `transB` arguments  from the BLAS interface: `gemm(alpha, A, B, beta, C)`.


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