Hello, I have not tried to compile SAGE v3.0 yet, nor am I familiar with Arch or its method of distributing packages. However, I did create the RPM distributable version of SAGE. Upon reviewing the PKGBUILD file available on the link you provided, I thought we might be able to share our knowledge of building SAGE in an environment where it's being built on one machine and targeted for binary distribution on another.
The source RPM can be found at http://rpm.pbone.net/index.php3/stat/4/idpl/6391689/com/sage-2.10.2-1pclos2007.i586.rpm.html (yes, I know it's a slightly out of date version, but I'm waiting for the final 3.0 release to roll the new RPM). The SPEC file, which seems to be equivalent to the PKGBUILD file in functionality, is below. Of particular interest might be the %install section which is effectively a shell shell script executed when packaging up everything into the deliverable RPM. Another section of interest is %post which is effectively a shell script that executes on the target system after all files are extracted from the RPM, but before the user can actually use their new SAGE installation. %define name sage %define summary SAGE: Open Source Mathematics Software %define version 2.10.2 %define release %mkrel 1 %define sagedir %buildroot%{_libdir} %define dbgap database_gap-4.4.10 # until this works fully, do NOT set this to 1. Unfortunately, this means that we will be building A LOT MORE than necessary # there is actually some debate on sage-devel forums whether or not building against system libraries is even a good idea %define use_system_equivalents 0 Summary: %{summary} Name: %{name} Version: %{version} Release: %{release} License: GPLv2 Group: Sciences/Mathematics URL: http://www.sagemath.org/ Source: http://www.sagemath.org/dist/src/%{name}-%{version}.tar Source1: %{name}.png Source2: http://www.sagemath.org//packages/optional/%{dbgap}.spkg Source3: deps Source4: sage-finalconfig.pl BuildRoot: %{_tmppath}/%{name}-%{version}-buildroot Packager: Gri6507 Distribution: PCLinuxOS # Do not automatically look for dependencies because this will find a large number of # library and perl dependencies that are built as part of SAGE and not delivered to # their respective proper target directories. So, it would be unwise to say that this # package "provides" those libraries since the provision is only made for SAGE. AutoReqProv: No BuildRequires: perl BuildRequires: binutils BuildRequires: openssh BuildRequires: tar BuildRequires: tetex-latex BuildRequires: latex2html BuildRequires: bison BuildRequires: flex BuildRequires: libreadline5-devel BuildRequires: kdegraphics-kpdf BuildRequires: kash >= 2006.02.05-2 BuildRequires: macaulay2 %if "%{?use_system_equivalents}" == "1" BuildRequires: libpython-devel BuildRequires: python BuildRequires: python-scons BuildRequires: libblas-devel BuildRequires: liblapack-devel BuildRequires: atlas BuildRequires: libgfortran BuildRequires: gcc-gfortran BuildRequires: libgmp-devel BuildRequires: libtermcap-devel BuildRequires: libreadline-devel BuildRequires: R-base BuildRequires: ntl-devel BuildRequires: libgd-devel BuildRequires: libopencdk-devel BuildRequires: libgpg-error-devel BuildRequires: libgcrypt-devel BuildRequires: libgnutls-devel BuildRequires: gnutls BuildRequires: scons BuildRequires: libsqlite3_0-devel BuildRequires: mercurial BuildRequires: libfac BuildRequires: zlib-devel BuildRequires: libfreetype-devel BuildRequires: libpng-devel BuildRequires: clisp BuildRequires: python-gd BuildRequires: IPython %else # the following standand alone packages are replaced by SAGE's version Obsoletes: R-base Obsoletes: mercurial Obsoletes: ipython Provides: R-base Provides: mercurial Provides: ipython Provides: maxima Provides: singular %endif # the following requires are needed because the user may ask SAGE to install optional pacakges Requires: bzip2 Requires: autoconf Requires: automake Requires: gcc-c++ Requires: elfutils Requires: gettext Requires: libgettextmisc Requires: libstdc++6 Requires: libtool-base Requires: wget Requires: libpython2.4-devel Requires: binutils Requires: tetex-latex Requires: latex2html Requires: bison Requires: flex # These are needed to make SAGE run Requires: perl-Expect Requires: ImageMagick Requires: kdegraphics-kpdf Requires: octave Requires: kash >= 2006.02.05-2 Requires: macaulay2 Requires: desktop-common-data Requires: gnuplot Requires: python Requires: openssh Requires: libopenssl0.9.8 >= 0.9.8e %if "%{?use_system_equivalents}" == "1" Requires: libpython Requires: python Requires: python-scons Requires: libblas Requires: liblapack Requires: atlas Requires: libgfortran Requires: gcc-gfortran Requires: libgmp Requires: libtermcap Requires: libreadline Requires: R-base Requires: ntl-devel Requires: libgd Requires: libopencdk Requires: libgpg-error Requires: libgcrypt Requires: libgnutls Requires: gnutls Requires: scons Requires: libsqlite3_0 Requires: mercurial Requires: libfac Requires: zlib Requires: libfreetype Requires: libpng Requires: clisp Requires: python-gd Requires: ipython %endif %description Use SAGE for studying a huge range of mathematics, including algebra, calculus, elementary to very advanced number theory, cryptography, numerical computation, commutative algebra, group theory, combinatorics, graph theory, and exact linear algebra. SAGE makes it easy for you to use most mathematics software together. SAGE includes interfaces to Magma, Maple, Mathematica, MATLAB, and MuPAD, and the free programs Axiom, GAP, GP/PARI, Macaulay2, Maxima, Octave, and Singular. SAGE also provides the following toolsets * GAP - groups, discrete math * Singular - polynomial computation * PARI and GP - number theory * Maxima - symbolic manipulation * mwrank, ec, simon, sea - elliptic curves * R-base - A language for data analysis and graphics * ipithon * hg - Mercurial source code management system * hgmerge - default wrapper to merge files in Mercurial SCM system * much much more %package doc Summary: %name documentation Group: Sciences/Mathematics Provides: %name-doc Requires: %name = %{version}-%{release} Requires: info %description doc Documentation for %name %package devel Summary: %name development files Group: Sciences/Mathematics Provides: %name-devel Requires: %name = %{version}-%{release} AutoReqProv: no %description devel Development files for %name %prep %setup -q %if "%{?use_system_equivalents}" == "1" # Follow the MUCH shorter instructions on building SAGE %{__cp} %SOURCE3 spkg/standard/ # adjust the few stubborn packages for the build against system components pushd . popd %endif # this step will take a VERY LONG TIME (about 3.5 hours on my 3000+ Semptron) %build # set some environment variables %make %{?jobs:-j %jobs} PATH=$RPM_BUILD_DIR/%{name}-%{version}:$PATH # the documentation is only generated after the make is complete, so don't look for this directory before the make pushd devel/doc # making of PDF documentation causes problems, so let's skip that #%make pdf # Make the HTML documentation causes problems so, let fix it first # This is listed under Trac ticket #1984 (oooooooohhhh .. big brother is watching you) %{__sed} -i -e "s/@mathbf/mathbf/g" ../doc-main/ref/ref.toc %make html # Build the const documentation pushd const ./build_pdf popd popd # This step take a good hour or so %check PATH=$RPM_BUILD_DIR/%{name}-%{version}:$PATH %make test # this step take about a half hour %install PATH=$RPM_BUILD_DIR/%{name}-%{version}:$PATH # install scripts first %{__mkdir_p} %buildroot%{_bindir} ./%name -c 'install_scripts("%buildroot%{_bindir}")' # This was submitted under Trac #1753 # when these scripts are created, the kash and M2 executables are overwritten by sage's ones, but it still points to the original one :-) %{__mv} %buildroot%{_bindir}/kash %buildroot%{_bindir}/kash.%{name} %{__mv} %buildroot%{_bindir}/M2 %buildroot%{_bindir}/M2.%{name} # install the "strongly suggested" optional package, but do so locally without downloading it first %{__mkdir_p} $RPM_BUILD_DIR/%{name}-%{version}/spkg/optional/ %{__cp} %SOURCE2 $RPM_BUILD_DIR/%{name}-%{version}/spkg/optional/ ./%name -i %dbgap # install const documentation pushd devel/doc/const %{__mkdir_p} %buildroot%{_datadir}/doc/%{name} %{__cp} const.pdf %buildroot%{_datadir}/doc/%{name} popd # finally install everything DESTDIR=%sagedir %make install %{__mv} %{sagedir}/bin/%{name} $RPM_BUILD_ROOT/%{_bindir}/%{name} # Trac ticket #1792 %{__sed} -i -e '[EMAIL PROTECTED]@SAGE_ROOT="%{_libdir}/%{name}"@' $RPM_BUILD_ROOT/%{_bindir}/%{name} %{__sed} -i -e '[EMAIL PROTECTED]@SAGE_ROOT="%{_libdir}/%{name}"@' $RPM_BUILD_ROOT/%{_libdir}/%{name}/%{name} rmdir %{sagedir}/bin # The following was reported under Trac ticker #1752 which was marked repaired for the upcoming 2.10 release # fix some permissions %{__chmod} 755 %{sagedir}/%{name}/local/lib/libhistory.so.* %{__chmod} 755 %{sagedir}/%{name}/local/lib/libreadline.so.* # The following was reported under Trac #1830 # for the time being, just set it to some bogus value and let SAGE configure itself properly after install %{__sed} -i -e '[EMAIL PROTECTED]@unconfigured@' %{sagedir}/%{name}/local/lib/% {name}-current-location.txt # make sage's tmp directory's permissions wide open. This is needed for things like running tests %{__chmod} -R 777 %{sagedir}/%{name}/tmp # deliver the perl executable to do the final configuration of sage %__install -m 700 %SOURCE4 %{sagedir}/%{name}/local/bin/ # trim out the *.pyc and *.pyo files. These will be regenerated at install time. find %{sagedir}/%{name} -name *.py[co] | xargs rm $1 # create a desktop file %{__mkdir_p} %{buildroot}%{_datadir}/icons %{__cp} %SOURCE1 %{buildroot}%{_datadir}/icons/ %{__mkdir_p} %{buildroot}%{_datadir}/applications cat > %{buildroot}%{_datadir}/applications/%{name}.desktop << EOF [Desktop Entry] Encoding=UTF-8 Name=%name Comment=%summary Exec=%{_bindir}/%name -notebook Icon=%name Terminal=true Type=Application Categories=Development;Engineering;X-MandrivaLinux-MoreApplications- Sciences-Mathematics; EOF %clean test "x$RPM_BUILD_ROOT" != "x/" && rm -rf $RPM_BUILD_ROOT %post # let's clean up the kash and M2 mess created by sage (see above comments) %{__mv} %{_bindir}/kash %{_bindir}/kash.kash %{__mv} %{_bindir}/kash.%{name} %{_bindir}/kash %{__sed} -i -e '[EMAIL PROTECTED]@Exec=kash.kash@' %{_datadir}/applications/ kash3.desktop %{__mv} %{_bindir}/M2 %{_bindir}/M2.M2 %{__mv} %{_bindir}/M2.%{name} %{_bindir}/M2 %{__sed} -i -e '[EMAIL PROTECTED]@M2\.M2@' %{_datadir}/applications/ Macaulay2.desktop # update the menus %update_menus %update_desktop_database &> /dev/null ||: # run sage for the first time to regenerate the python files with the correct path. ORIG_SAGEDIR='sage_user_directory_not_present' if [ -d $HOME/.sage ] then %{__mv} $HOME/.sage $HOME/.sage.$$ ORIG_SAGEDIR=$HOME/.sage.$$ fi export ORIG_SAGEDIR %{_libdir}/%{name}/local/bin/sage-finalconfig.pl &> /dev/null ||: %{__rm} -rf $HOME/.sage if [ -d $ORIG_SAGEDIR ] then %{__mv} $ORIG_SAGEDIR $HOME/.sage fi %postun # let's clean up the kash and M2 mess created by sage (see above comments) %{__mv} %{_bindir}/kash %{_bindir}/kash.%{name} %{__mv} %{_bindir}/kash.kash %{_bindir}/kash %{__sed} -i -e '[EMAIL PROTECTED]@Exec=kash@' %{_datadir}/applications/ kash3.desktop %{__mv} %{_bindir}/M2 %{_bindir}/M2.%{name} %{__mv} %{_bindir}/M2.M2 %{_bindir}/M2 %{__sed} -i -e '[EMAIL PROTECTED]@M2@' %{_datadir}/applications/ Macaulay2.desktop %update_menus %update_desktop_database &> /dev/null ||: %clean_menus %clean_desktop_database &> /dev/null ||: %files %defattr(-,root,root,755) %{_bindir}/R %{_bindir}/gap %{_bindir}/gp %{_bindir}/hg %{_bindir}/hgmerge %{_bindir}/ipython %{_bindir}/kash.sage %{_bindir}/M2.sage %{_bindir}/maxima %{_bindir}/mwrank %{_bindir}/sage %{_bindir}/singular %{_libdir}/%{name}/COPYING.txt %{_libdir}/%{name}/README.txt %{_libdir}/%{name}/HISTORY.txt %{_libdir}/%{name}/data/ %{_libdir}/%{name}/ipython/ %{_libdir}/%{name}/local/LIB %{_libdir}/%{name}/local/bin/ %{_libdir}/%{name}/local/d%{name}/ %{_libdir}/%{name}/local/java/ %{_libdir}/%{name}/local/lib/ %{_libdir}/%{name}/local/libexec/ %{_libdir}/%{name}/local/share/ %{_libdir}/%{name}/makefile %{_libdir}/%{name}/matplotlibrc %{_libdir}/%{name}/%{name}* %{_libdir}/%{name}/spkg/ %{_libdir}/%{name}/tmp/ %{_datadir}/applications/%{name}.desktop %{_iconsdir}/%{name}.png %{_libdir}/%{name}/devel/%{name} %{_libdir}/%{name}/devel/%{name}-main/ # Not wanted %exclude %{_libdir}/%{name}/install.log %exclude %{_libdir}/%{name}/local/lib/gap-*/doc/ %exclude %{_libdir}/%{name}/local/lib/gap-*/tst/ %exclude %{_libdir}/%{name}/local/lib/gap-*/src/ %exclude %{_libdir}/%{name}/local/share/doc/ %exclude %{_libdir}/%{name}/local/share/info/ %exclude %{_libdir}/%{name}/local/share/man/ %exclude %{_libdir}/%{name}/local/share/maxima/*/doc %exclude %{_libdir}/%{name}/local/share/pari/doc %exclude %{_libdir}/%{name}/local/share/polybori/doc %exclude %{_libdir}/%{name}/data/extcode/.hg/ %exclude %{_libdir}/%{name}/local/bin/.hg/ %exclude %{_libdir}/%{name}/spkg/base/.hg/ %files doc %defattr(-,root,root,755) %{_libdir}/%{name}/devel/doc %{_libdir}/%{name}/devel/doc-main/ %{_libdir}/%{name}/doc %{_libdir}/%{name}/example.%{name} %{_libdir}/%{name}/examples/ %{_libdir}/%{name}/local/doc/ %{_libdir}/%{name}/local/info/ %{_libdir}/%{name}/local/lib/gap-*/doc/ %{_libdir}/%{name}/local/man/man*/ %{_datadir}/doc/%{name}/const.pdf %{_libdir}/%{name}/local/share/doc/ %{_libdir}/%{name}/local/share/info/ %{_libdir}/%{name}/local/share/man/ %{_libdir}/%{name}/local/share/maxima/*/doc %{_libdir}/%{name}/local/share/pari/doc %{_libdir}/%{name}/local/share/polybori/doc %files devel %defattr(-,root,root,-) %{_libdir}/%{name}/local/include/ %{_libdir}/%{name}/local/lib/gap-*/src/ %{_libdir}/%{name}/data/extcode/.hg/ %{_libdir}/%{name}/local/bin/.hg/ %{_libdir}/%{name}/spkg/base/.hg/ %changelog * Fri Feb 22 2008 Paul Grinberg <gri6507 TA yahoo TOD com> 2.10.2-1pclos2007 - Updated to version 2.10.2 - Updated openssl version dependency - fix the problem with kash desktop file manipulation - preserve user's personla sage directory when installing - From Santa's Little Helper on MyPCLinuxOS * Sun Feb 17 2008 Paul Grinberg <gri6507 TA yahoo TOD com> 2.10.1-2pclos2007 - Do not deliver *.pyc and *.pyo files - generate those at RPM install time instead by running SAGE for the first time * Mon Feb 4 2008 Paul Grinberg <gri6507 TA yahoo TOD com> 2.10.1-1pclos2007 - Updated to version 2.10.1 * Tue Jan 29 2008 Paul Grinberg <gri6507 TA yahoo TOD com> 2.10-1pclos2007 - Corrected the Provides: list to include R-base and mercurial - Updated to version 2.10 * Fri Jan 18 2008 Paul Grinberg <gri6507 TA yahoo TOD com> 2.9.3-3pclos2007 - Initial build for PCLinuxOS 2007 On Apr 14, 3:14 pm, mabshoff <[EMAIL PROTECTED] dortmund.de> wrote: > Hi. > > I am currently in the finishing stage on getting gcc 4.3 build support > into Sage 3.0.alpha5. I am doing so on an 64 bit Arch Linux VMWare > image and am down to the following bug (which is not gcc 4.3 related): > > File "/home/mabshoff/sage-3.0.alpha3/tmp/real_double.py", line 546: > sage: a = -RDF(1)/RDF(0); a.str() > Expected: > '-inf' > Got: > 'inf' > ********************************************************************** > File "/home/mabshoff/sage-3.0.alpha3/tmp/real_double.py", line 981: > sage: a.is_positive_infinity() > Expected: > False > Got: > True > ********************************************************************** > File "/home/mabshoff/sage-3.0.alpha3/tmp/real_double.py", line 993: > sage: a.is_negative_infinity() > Expected: > True > Got: > False > ********************************************************************** > 3 items had failures: > 1 of 6 in __main__.example_35 > 1 of 5 in __main__.example_67 > 1 of 5 in __main__.example_68 > ***Test Failed*** 3 failures. > For whitespace errors, see the file /home/mabshoff/sage-3.0.alpha3/ > tmp/.doctest_real_double.py > [17.1 s] > exit code: 1024 > > It is an issue in GSL which I have already fixed with OSX 10.5, so it > will be easy to fix on Arch Linux, too. I am wondering what the exact > Posix behavior dictates here since the fallback GSL isinf function > also returns -inf instead of inf. > > On another note: Is the packager of Sage on Arch around here? I.e. a/ > the person who is involved with > > http://aur.archlinux.org/packages.php?ID=14429 > > I got a couple notes for Sage 3.0 on Arch Linux and I would prefer to > have the packagers be aware of the issues before they run into it. > Probably the most important is that on Arch with gcc 4.3 you *must* > set SAGE_FORTAN and SAGE_FORTRAN_LIB to use gfortran from gcc 4.3 > instead of using the g95 binary we provide since that seems horribly > broken on Arch. > > Cheers, > > Michael --~--~---------~--~----~------------~-------~--~----~ To post to this group, send email to sage-devel@googlegroups.com To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http://groups.google.com/group/sage-devel URLs: http://www.sagemath.org -~----------~----~----~----~------~----~------~--~---
