Please try https://trac.sagemath.org/ticket/31498 which should also
fix gap_packages.py error.

On Mon, Jun 7, 2021 at 1:32 PM Emmanuel Charpentier
<emanuel.charpent...@gmail.com> wrote:
>
> On Debian testing, upgrading 9.4.beta0 to beta1 and running ptestlong leads to
>
> One timeout on parigp.py (already reported numerous times)
>
> one permanent failure on gap-packages.py, also reported numerous times but 
> whose report has changed :
>
> ### This has been seen numerous times ####################
> charpent@zen-book-flip:/usr/local/sage-9$ sage -t --long --warn-long 218.0 
> --random-seed=0 src/sage/tests/gap_packages.py  # 1 doctest failed
> Running doctests with ID 2021-06-07-14-21-14-440d82f5.
> Git branch: develop
> Using 
> --optional=build,debian,dochtml,dot2tex,fricas,gap_jupyter,gap_packages,kenzo,libsemigroups,pip,pysingular,saclib,sage,sage_spkg,singular_jupyter
> Doctesting 1 file.
> sage -t --long --warn-long 218.0 --random-seed=0 
> src/sage/tests/gap_packages.py
> **********************************************************************
> File "src/sage/tests/gap_packages.py", line 8, in sage.tests.gap_packages
> Failed example:
>     test_packages(pkgs, only_failures=True)    # optional - gap_packages
> Expected:
>     ...
>       Status   Package   GAP Output
>     +--------+---------+------------+
> Got:
>       Status   Package   GAP Output
>     +--------+---------+------------+
> **********************************************************************
> 1 item had failures:
>    1 of   5 in sage.tests.gap_packages
>     [11 tests, 1 failure, 4.61 s]
> ----------------------------------------------------------------------
> sage -t --long --warn-long 218.0 --random-seed=0 
> src/sage/tests/gap_packages.py  # 1 doctest failed
> ----------------------------------------------------------------------
> Total time for all tests: 4.6 seconds
>     cpu time: 4.2 seconds
>     cumulative wall time: 4.6 seconds
> ### This is new :  ####################
> ============================= test session starts 
> ==============================
> platform linux -- Python 3.9.2, pytest-6.2.4, py-1.10.0, pluggy-0.13.1
> rootdir: /usr/local/sage-9/src, configfile: tox.ini
> collected 1 item
>
> src/sage/tests/gap_packages.py E                                         
> [100%]
>
> ==================================== ERRORS 
> ====================================
> _______________________ ERROR at setup of test_packages 
> ________________________
> file /usr/local/sage-9/src/sage/tests/gap_packages.py, line 25
>   def test_packages(packages, only_failures=False):
> E       fixture 'packages' not found
> >       available fixtures: add_imports, cache, capfd, capfdbinary, caplog, 
> > capsys, capsysbinary, doctest_namespace, monkeypatch, pytestconfig, 
> > record_property, record_testsuite_property, record_xml_attribute, recwarn, 
> > tmp_path, tmp_path_factory, tmpdir, tmpdir_factory
> >       use 'pytest --fixtures [testpath]' for help on them.
>
> /usr/local/sage-9/src/sage/tests/gap_packages.py:25
> =========================== short test summary info 
> ============================
> ERROR src/sage/tests/gap_packages.py::test_packages
> =============================== 1 error in 0.15s 
> ===============================
>
> I suppose that installing pytest may have changed failure reports.
>
> HTH,
>
> Le dimanche 6 juin 2021 à 20:40:20 UTC+2, Volker Braun a écrit :
>>
>> As always, you can get the latest beta version from the "develop" git 
>> branch. Alternatively, the self-contained source tarball is at 
>> http://www.sagemath.org/download-latest.html
>>
>>
>> 30ee8d6505 (tag: 9.4.beta1, trac/develop) Updated SageMath version to 
>> 9.4.beta1
>> 7690208434 Trac #31903: Build errors in padic_relaxed_element
>> 605c100c46 Trac #31848: Random failure: sage.libs.gap.util.GAPError: Error, 
>> OnSets: <set> must be a set
>> 24a34ee595 Trac #31825: Failure when testing sage_conf version
>> 5067635403 Trac #31692: Refactor display behavior of mixed forms
>> 08b5a55b44 Trac #31691: Turn mixed form algebra into de Rham complex
>> e30645c055 Trac #31686: Speed up factoring finite field multiplicative order
>> 490c3ddfeb Trac #31684: Improve WordMorphism._language_naive
>> 3e413ce3b4 Trac #31681: DiGraph.layout_acyclic_dummy assumes it can sort 
>> lists of vertices
>> 5b23c1fac2 Trac #31677: Open subsets of arbitrary subsets of manifolds
>> a8ed75663a Trac #31676: Hash of mpmath complex numbers produces OverFlowError
>> 24c78cf7f3 Trac #31674: Make open subsets of immersed/embedded submanifolds 
>> immersed/embedded submanifolds
>> 2f2b1540f7 Trac #31658: Slight speed-up in copy method
>> fc7a3728c8 Trac #31654: copy_from for scalar fields
>> db698c31ed Trac #31653: Images of continuous maps and embedded submanifolds 
>> as manifold subsets
>> b573a54ba3 Trac #31650: improve LazyImport
>> 8600573a7f Trac #31647: Update sympy to 1.8
>> b2aa0f6261 Trac #31633: Simplify VectorField.__call__
>> 4200c96400 Trac #31619: Cholesky factorization and positive-definite testing 
>> over inexact rings
>> 60380a3cf3 Trac #31618: Some documentation improvements in 
>> sage.modular.quatalg.brandt
>> ab0715d126 Trac #31615: faster order complex for posets
>> c95fe8492a Trac #31614: Remove dead _cholesky_decomposition_ from matrix2.pyx
>> 749b0ad122 Trac #31613: ClusterAlgebra.greedy_element bug and further 
>> improvements
>> ad89df812b Trac #31609: Add method tangent_vector to differentiable manifolds
>> 63c3d0fecb Trac #31594: Accept giac-1.7.x from the system
>> c58463cf86 Trac #31526: Drop support for optional packages with system gcc 
>> 4.x on ubuntu-trusty, debian-jessie, linuxmint-17, centos-7
>> 8d55a3f756 Trac #31489: Galois subgroups
>> 9c85a6c1cf Trac #30352: Interface to the KnotInfo and LinkInfo databases
>> 9f031cdb05 Trac #29222: Improvements to padic polylog
>> 9caac06757 Trac #28890: Install fewer static libraries
>> e94bd31252 Trac #26635: Major extensions to local components code
>> 9f3988d9a5 Trac #21203: basic element and parent for k-regular sequences
>> 3b414bea4b Trac #20331: A MIPVariable's repr should include some useful 
>> information
>> 061d4b71df Trac #31860: Restore support for sage-bootstrap-python = python 
>> 3.6
>> 6aa4ecee16 (tag: 9.4.beta0) Updated SageMath version to 9.4.beta0
>>
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