Hello, In a Mac OSX 10.11.6 with Xcode 8.2.1, compiling sage 8.2.beta6 from sources i get the error message below:
$ make /Applications/Xcode.app/Contents/Developer/usr/bin/make build/make/Makefile --stop ./bootstrap -d rm -rf config configure build/make/Makefile-auto.in configure.ac:390: installing 'config/compile' configure.ac:105: installing 'config/config.guess' configure.ac:105: installing 'config/config.sub' configure.ac:68: installing 'config/install-sh' configure.ac:68: installing 'config/missing' rm -f config.log mkdir -p logs/pkgs ln -s logs/pkgs/config.log config.log running CONFIG_SHELL=/bin/sh /bin/sh ./configure --no-create --no-recursion checking for a BSD-compatible install... /usr/local/opt/coreutils/libexec/gnubin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/local/opt/coreutils/libexec/gnubin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for root user... no checking build system type... x86_64-apple-darwin15.6.0 checking host system type... x86_64-apple-darwin15.6.0 checking for ar... yes checking for m4... yes checking for ranlib... yes checking for strip... yes checking for GNU or BSD tar... /usr/bin/tar checking for GNU make... /usr/bin/make checking for latex... yes checking for perl... /usr/bin/perl checking for Perl version 5.8.0 or later... yes checking for git... /usr/bin/git checking for yasm... no dyld: Library not loaded: /usr/local/opt/mpfr/lib/libmpfr.4.dylib Referenced from: /usr/local/bin/awk Reason: image not found local/bin/sage-env: line 339: [: -ge: unary operator expected <built-in>: error: unknown value '10.-4' of -mmacosx-version-min conftest.cpp:2:6: error: 'inf' does not name a type auto inf = 1.0 / std::complex<double>(); ^ configure: Installing GCC because installed g++ is broken checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of gcc... none checking how to run the C preprocessor... gcc -E checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking for gfortran... gfortran checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking for C compiler vendor... clang checking for gcc... gcc checking whether we are using the GNU Objective C compiler... yes checking whether gcc accepts -g... yes checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU Objective C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking for curl 7.22... /usr/bin/curl checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking curl/curl.h usability... yes checking curl/curl.h presence... yes checking for curl/curl.h... yes checking how to run the C++ preprocessor... g++ -E checking complex.h usability... yes checking complex.h presence... yes checking for complex.h... yes checking whether g++ supports C++11 features by default... no checking whether g++ supports C++11 features with -std=gnu++11... yes checking for gcc option to accept ISO C99... none needed checking for Fortran flag needed to accept free-form source... -ffree-form checking for sqrt in -lm... yes *************************************************** *************************************************** You are using OS X Lion (or later). You are strongly advised to install Apple's latest Xcode unless you already have it. You can install this using the App Store. Also, make sure you install Xcode's Command Line Tools -- see Sage's README.txt. configure: error: "found MacPorts in /opt/local/bin/port. Either: (1) rename /opt/local and /sw, or (2) change PATH and DYLD_LIBRARY_PATH (Once Sage is built, you can restore them.) If you would like to try to build Sage anyway (to help porting), export the variable 'SAGE_PORT' to something non-empty. make[1]: *** [build/make/Makefile] Error 1 make: *** [all] Error 2 I didn't really understand option (1) -- rename it to anything? Other things won't break? For (2), the environment variables are: $ echo $DYLD_LIBRARY_PATH /Users/forets/Tools/spaceex_src/sspaceex_local/lib/ $ echo $PATH /opt/local/bin:/opt/local/sbin:/Users/forets/Library/Python/2.7/bin/:/Users/forets/.rbenv/shims:/Applications/usr/bin:/Applications/Julia-0.6.app/Contents/Resources/julia/bin/:/Users/forets/Projects/OCRG/ocrg_git/:/Users/forets/Tools/spaceex_src/sspaceex/Release:/Applications/MATLAB_R2016a.app/bin:~/Tools/sage-master:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/opt/coreutils/libexec/gnubin:/usr/local/bin:/usr/local/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Library/TeX/texbin I tried to $ unset DYLD_LIBRARY_PATH , and to $ export PATH= .... (removing the paths /opt/local/bin and /opt/local/sbin). After these changes, now i get: $ make /Applications/Xcode.app/Contents/Developer/usr/bin/make build/make/Makefile --stop make[1]: `build/make/Makefile' is up to date. build/bin/sage-logger \ "cd build/make && ./install 'all'" logs/install.log *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: *** Apple_PubSub_Socket_Render=/private/tmp/com.apple.launchd.B1SYzE4DrX/Render CARLIN_REACH_ROOT=/Users/forets/Projects/nliftZonotopes CONFIGURED_CC=gcc CONFIGURED_CXX=g++ CONFIGURED_FC=gfortran CONFIGURED_OBJC=@OBJ@ CONFIGURED_OBJCXX=g++ CORA_ROOT=/Users/forets/Tools/CORA_2016_orig DISPLAY=/private/tmp/com.apple.launchd.vkRKLUhZIY/org.macosforge.xquartz:0 DYLD_LIBRARY_PATH=/Users/forets/Tools/spaceex_src/sspaceex_local/lib/ GRB_LICENSE_FILE=/Users/forets/gurobi.lic HOME=/Users/forets LC_ALL=en_US.UTF-8 LC_CTYPE=UTF-8 LOGNAME=forets MAKE=make MAKEFLAGS= V=1 MAKELEVEL=1 MANPATH=/opt/local/share/man: MFLAGS= PATH=/Users/forets/sage-src/sage/build/bin:/Users/forets/sage-src/sage/src/bin:/Users/forets/sage-src/sage/local/bin:/Users/forets/Library/Python/2.7/bin/:/Users/forets/.rbenv/shims:/Applications/usr/bin:/Applications/Julia-0.6.app/Contents/Resources/julia/bin/:/Users/forets/Projects/OCRG/ocrg_git/:/Users/forets/Tools/spaceex_src/sspaceex/Release:/Applications/MATLAB_R2016a.app/bin:/Users/forets/Tools/sage-master:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/opt/coreutils/libexec/gnubin:/usr/local/bin:/usr/local/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Library/TeX/texbin PWD=/Users/forets/sage-src/sage/build/make PYTHONPATH=/Users/forets/sage-src/sage/local RBENV_SHELL=bash SAGE_EXTCODE=/Users/forets/sage-src/sage/local/share/sage/ext SAGE_LOCAL=/Users/forets/sage-src/sage/local SAGE_LOGS=/Users/forets/sage-src/sage/logs/pkgs SAGE_ORIG_PATH=/Users/forets/Library/Python/2.7/bin/:/Users/forets/.rbenv/shims:/Applications/usr/bin:/Applications/Julia-0.6.app/Contents/Resources/julia/bin/:/Users/forets/Projects/OCRG/ocrg_git/:/Users/forets/Tools/spaceex_src/sspaceex/Release:/Applications/MATLAB_R2016a.app/bin:/Users/forets/Tools/sage-master:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/opt/coreutils/libexec/gnubin:/usr/local/bin:/usr/local/bin:/Library/Frameworks/Python.framework/Versions/3.5/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Library/TeX/texbin SAGE_ORIG_PATH_SET=True SAGE_ROOT=/Users/forets/sage-src/sage SAGE_SHARE=/Users/forets/sage-src/sage/local/share SAGE_SPKG_INST=/Users/forets/sage-src/sage/local/var/lib/sage/installed SAGE_SRC=/Users/forets/sage-src/sage/src SAGE_VERSION=8.2.beta6 SHELL=/bin/bash SHLVL=4 SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.XbkLnbFxaK/Listeners TERM=xterm-256color TERM_PROGRAM=Apple_Terminal TERM_PROGRAM_VERSION=361.1 TERM_SESSION_ID=50346A6E-89DE-4F83-8F59-4FB8BCB22954 TMPDIR=/var/folders/b_/qy7kpq613ld0g06jy9g16hz00000gp/T/ USER=forets XPC_FLAGS=0x0 XPC_SERVICE_NAME=0 _=/usr/local/opt/coreutils/libexec/gnubin/env __CF_USER_TEXT_ENCODING=0x1F6:0x0:0x0 *********************************************** make base sage-logger -p 'sage-spkg pkgconf-0.9.7.p0' '/Users/forets/sage-src/sage/logs/pkgs/pkgconf-0.9.7.p0.log' [pkgconf-0.9.7.p0] dyld: Library not loaded: /usr/local/opt/mpfr/lib/libmpfr.4.dylib [pkgconf-0.9.7.p0] Referenced from: /usr/local/bin/awk [pkgconf-0.9.7.p0] Reason: image not found [pkgconf-0.9.7.p0] /Users/forets/sage-src/sage/src/bin/sage-env: line 339: [: -ge: unary operator expected [pkgconf-0.9.7.p0] Found local metadata for pkgconf-0.9.7.p0 [pkgconf-0.9.7.p0] Using cached file /Users/forets/sage-src/sage/upstream/pkgconf-0.9.7.tar.gz [pkgconf-0.9.7.p0] pkgconf-0.9.7.p0 [pkgconf-0.9.7.p0] ==================================================== [pkgconf-0.9.7.p0] Setting up build directory for pkgconf-0.9.7.p0 [pkgconf-0.9.7.p0] Finished extraction [pkgconf-0.9.7.p0] No patch files found in ../patches [pkgconf-0.9.7.p0] **************************************************** [pkgconf-0.9.7.p0] Host system: [pkgconf-0.9.7.p0] Darwin Verimags-MacBook-Pro.local 15.6.0 Darwin Kernel Version 15.6.0: Wed Nov 2 20:30:56 PDT 2016; root:xnu-3248.60.11.1.2~2/RELEASE_X86_64 x86_64 i386 MacBookPro11,4 Darwin [pkgconf-0.9.7.p0] **************************************************** [pkgconf-0.9.7.p0] C compiler: gcc [pkgconf-0.9.7.p0] C compiler version: [pkgconf-0.9.7.p0] Using built-in specs. [pkgconf-0.9.7.p0] COLLECT_GCC=gcc [pkgconf-0.9.7.p0] COLLECT_LTO_WRAPPER=/Users/forets/sage-src/sage/local/libexec/gcc/x86_64-apple-darwin15.6.0/5.4.0/lto-wrapper [pkgconf-0.9.7.p0] Target: x86_64-apple-darwin15.6.0 [pkgconf-0.9.7.p0] Configured with: ../src/configure --prefix=/Users/forets/sage-src/sage/local --with-local-prefix=/Users/forets/sage-src/sage/local --with-gmp=/Users/forets/sage-src/sage/local --with-mpfr=/Users/forets/sage-src/sage/local --with-mpc=/Users/forets/sage-src/sage/local --with-system-zlib --disable-multilib --disable-nls --enable-languages=c,c++,fortran --disable-libitm --with-build-config=bootstrap-debug --without-isl --without-cloog [pkgconf-0.9.7.p0] Thread model: posix [pkgconf-0.9.7.p0] gcc version 5.4.0 (GCC) [pkgconf-0.9.7.p0] **************************************************** [pkgconf-0.9.7.p0] Configuring pkgconf-0.9.7.p0 [pkgconf-0.9.7.p0] checking for gcc... gcc [pkgconf-0.9.7.p0] checking whether the C compiler works... no [pkgconf-0.9.7.p0] configure: error: in `/Users/forets/sage-src/sage/local/var/tmp/sage/build/pkgconf-0.9.7.p0/src': [pkgconf-0.9.7.p0] configure: error: C compiler cannot create executables [pkgconf-0.9.7.p0] See `config.log' for more details [pkgconf-0.9.7.p0] ******************************************************************************** [pkgconf-0.9.7.p0] Error configuring pkgconf-0.9.7.p0 [pkgconf-0.9.7.p0] ******************************************************************************** [pkgconf-0.9.7.p0] [pkgconf-0.9.7.p0] real 0m0.298s [pkgconf-0.9.7.p0] user 0m0.123s [pkgconf-0.9.7.p0] sys 0m0.144s [pkgconf-0.9.7.p0] ************************************************************************ [pkgconf-0.9.7.p0] Error installing package pkgconf-0.9.7.p0 [pkgconf-0.9.7.p0] ************************************************************************ [pkgconf-0.9.7.p0] Please email sage-devel (http://groups.google.com/group/sage-devel) [pkgconf-0.9.7.p0] explaining the problem and including the log file [pkgconf-0.9.7.p0] /Users/forets/sage-src/sage/logs/pkgs/pkgconf-0.9.7.p0.log [pkgconf-0.9.7.p0] Describe your computer, operating system, etc. [pkgconf-0.9.7.p0] If you want to try to fix the problem yourself, *don't* just cd to [pkgconf-0.9.7.p0] /Users/forets/sage-src/sage/local/var/tmp/sage/build/pkgconf-0.9.7.p0 and type 'make' or whatever is appropriate. [pkgconf-0.9.7.p0] Instead, the following commands setup all environment variables [pkgconf-0.9.7.p0] correctly and load a subshell for you to debug the error: [pkgconf-0.9.7.p0] (cd '/Users/forets/sage-src/sage/local/var/tmp/sage/build/pkgconf-0.9.7.p0' && '/Users/forets/sage-src/sage/sage' --sh) [pkgconf-0.9.7.p0] When you are done debugging, you can type "exit" to leave the subshell. [pkgconf-0.9.7.p0] ************************************************************************ make[2]: *** [/Users/forets/sage-src/sage/local/var/lib/sage/installed/pkgconf-0.9.7.p0] Error 1 make[1]: *** [all-toolchain] Error 2 real 0m0.749s user 0m0.337s sys 0m0.347s *************************************************************** Error building Sage. The following package(s) may have failed to build (not necessarily during this run of 'make all'): * package: mpir-2.7.2 log file: /Users/forets/sage-src/sage/logs/pkgs/mpir-2.7.2.log build directory: /Users/forets/sage-src/sage/local/var/tmp/sage/build/mpir-2.7.2 * package: pkgconf-0.9.7.p0 log file: /Users/forets/sage-src/sage/logs/pkgs/pkgconf-0.9.7.p0.log build directory: /Users/forets/sage-src/sage/local/var/tmp/sage/build/pkgconf-0.9.7.p0 * documentation: dochtml log file: /Users/forets/sage-src/sage/logs/pkgs/../dochtml.log The build directory may contain configuration files and other potentially helpful information. WARNING: if you now run 'make' again, the build directory will, by default, be deleted. Set the environment variable SAGE_KEEP_BUILT_SPKGS to 'yes' to prevent this. make: *** [all] Error 1 -- You received this message because you are subscribed to the Google Groups "sage-support" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-support+unsubscr...@googlegroups.com. To post to this group, send email to sage-support@googlegroups.com. Visit this group at https://groups.google.com/group/sage-support. For more options, visit https://groups.google.com/d/optout.