On Wed, Jul 01, 2015 at 01:51:26AM -0700, Jeffrey Tratner wrote: > If I used the test_view program directly, would that give me a reasonable > sense of runtime and compression performance?
Yes. It's a good test, but obviously not for production use. Test_view is using the same htslib functions that samtools does so they're basically the same performance (barring any other changes that have happened between 1.2 and current develop, which I think should have minimal performance impact). > Also, is there a release schedule for samtools? When is the next release > planned? There isn't a specific schedule, but we're meeting to nail down the specific feature list for 1.3 next week. The release will then happen Soon(TM) after (1 month?). Over to John for anything more concrete. James -- James Bonfield ([email protected]) | Hora aderat briligi. Nunc et Slythia Tova | Plurima gyrabant gymbolitare vabo; A Staden Package developer: | Et Borogovorum mimzebant undique formae, https://sf.net/projects/staden/ | Momiferique omnes exgrabure Rathi. -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE. ------------------------------------------------------------------------------ Don't Limit Your Business. Reach for the Cloud. GigeNET's Cloud Solutions provide you with the tools and support that you need to offload your IT needs and focus on growing your business. Configured For All Businesses. Start Your Cloud Today. https://www.gigenetcloud.com/ _______________________________________________ Samtools-help mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/samtools-help
