Thank you for the help! I now have SamTools installed on my Windows machine
using Cygwin. However, I did get 46 warnings of three different types when I
compiled. For example:
bam_plcmd.c:605:9: warning: array subscript has type ‘char’ [-Wchar-subscripts]
while ( len>0 && isspace(buf[len-1]) ) len--;
kprobaln.c:78:21: warning: variable ‘is_diff’ set but not used
[-Wunused-but-set-variable]
int bw, bw2, i, k, is_diff = 0, is_backward = 1, Pr;
misc/md5.c:151:5: warning: dereferencing type-punned pointer will break
strict-aliasing rules [-Wstrict-aliasing]
((uint32_t *) ctx->in)[14] = ctx->bits[0];
Should I be worried about these?
Thanks again!
Chris
Post doc
University of Utah
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