Using "trjconv -ur compact -pbc atom" worked.
JW
On 10/9/07, JW Feng <[EMAIL PROTECTED]> wrote:
> GMX users,
>
> In 3.3.1, I used "trjconv -ur compact -pbc whole " to convert a
> rhombic dodecahedron box so it could be displayed properly in VMD.
> This does not appear to be working in 3.3.2. Is there another way to
> convert a box so it displays properly in a visualization program?
>
> This is the command that I used,
> " echo 0 | trjconv -ur compact -pbc whole -f 1fsv_heat300.gro -s
> 1fsv_heat300.gro -o 1fsv_heat300_visual.gro"
>
> Thanks,
>
> JW
>
> --
> Jianwen A Feng
> Center for Computational Biology
> Washington University in St. Louis
>
--
Jianwen A Feng
Center for Computational Biology
Washington University in St. Louis
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