Re: [R] ggobi install
On Thu, Feb 12, 2009 at 3:41 PM, Michael Bibo michael_b...@health.qld.gov.au wrote: Mark Ungrin mark.ungrin at utoronto.ca writes: * Installing *source* package 'RGtk2' ... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for LIBGLADE... no configure: WARNING: libglade not found checking for INTROSPECTION... no checking for GTK... no configure: error: GTK version 2.8.0 required ERROR: configuration failed for package 'RGtk2' ** Removing '/home/mark/R/i486-pc-linux-gnu-library/2.6/RGtk2' * Installing *source* package 'rggobi' ... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GGOBI... configure: error: Package requirements (ggobi = 2.1.6) were not met: Package gtk+-2.0 was not found in the pkg-config search path. Perhaps you should add the directory containing `gtk+-2.0.pc' to the PKG_CONFIG_PATH environment variable Package 'gtk+-2.0', required by 'libggobi', not found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. Alternatively, you may set the environment variables GGOBI_CFLAGS and GGOBI_LIBS to avoid the need to call pkg-config. See the pkg-config man page for more details. Mark, The first thing I would look at is whether there are any *-dev packages in synaptic for the libraries etc that are 'missing'. These -dev packages contain the header files and are not necessary for running the application, but are necessary for installing other apps from source that interact with them. This is a surprisingly little-advertised issue with Linux packaging that I found out about from the R installation manual. Just to be a bit more specific, for building RGtk2 and rggobi you'll need gtk-dev(el?) and libxml2-devel which should install all the other devel dependencies. It's kind of strange that the GGobi package installs its header files (it is implicitly a devel package), but it does not bring in the devel packages of its dependencies. But aren't there binary Ubuntu/Debian packages on the repository for RGtk2 and rggobi? Michael Bibo __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] ggobi install
hi - not sure if this is the right spot to ask for help on this, probably a basic question... I am trying to install ggobi on R running on Ubuntu Hardy - I am new to both Linux R so the answer may be obvious I'm just missing it. I have installed GGobi via synaptic, but trying to install rggobi I get the following error - there's some path problem but I don't fully understand the error message: install.packages(rggobi) Warning in install.packages(rggobi) : argument 'lib' is missing: using '/home/mark/R/i486-pc-linux-gnu-library/2.6' also installing the dependency ‘RGtk2’ trying URL 'http://probability.ca/cran/src/contrib/RGtk2_2.12.8.tar.gz' Content type 'application/x-gzip' length 2169982 bytes (2.1 Mb) opened URL == downloaded 2.1 Mb trying URL 'http://probability.ca/cran/src/contrib/rggobi_2.1.10.tar.gz' Content type 'application/x-gzip' length 133907 bytes (130 Kb) opened URL == downloaded 130 Kb * Installing *source* package 'RGtk2' ... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for LIBGLADE... no configure: WARNING: libglade not found checking for INTROSPECTION... no checking for GTK... no configure: error: GTK version 2.8.0 required ERROR: configuration failed for package 'RGtk2' ** Removing '/home/mark/R/i486-pc-linux-gnu-library/2.6/RGtk2' * Installing *source* package 'rggobi' ... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GGOBI... configure: error: Package requirements (ggobi = 2.1.6) were not met: Package gtk+-2.0 was not found in the pkg-config search path. Perhaps you should add the directory containing `gtk+-2.0.pc' to the PKG_CONFIG_PATH environment variable Package 'gtk+-2.0', required by 'libggobi', not found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. Alternatively, you may set the environment variables GGOBI_CFLAGS and GGOBI_LIBS to avoid the need to call pkg-config. See the pkg-config man page for more details. ERROR: configuration failed for package 'rggobi' ** Removing '/home/mark/R/i486-pc-linux-gnu-library/2.6/rggobi' The downloaded packages are in /tmp/RtmpLbLLyB/downloaded_packages Warning messages: 1: In install.packages(rggobi) : installation of package 'RGtk2' had non-zero exit status 2: In install.packages(rggobi) : installation of package 'rggobi' had non-zero exit status please let me know thanks! Mark -- __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] ggobi install
Mark Ungrin mark.ungrin at utoronto.ca writes: * Installing *source* package 'RGtk2' ... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for LIBGLADE... no configure: WARNING: libglade not found checking for INTROSPECTION... no checking for GTK... no configure: error: GTK version 2.8.0 required ERROR: configuration failed for package 'RGtk2' ** Removing '/home/mark/R/i486-pc-linux-gnu-library/2.6/RGtk2' * Installing *source* package 'rggobi' ... checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for GGOBI... configure: error: Package requirements (ggobi = 2.1.6) were not met: Package gtk+-2.0 was not found in the pkg-config search path. Perhaps you should add the directory containing `gtk+-2.0.pc' to the PKG_CONFIG_PATH environment variable Package 'gtk+-2.0', required by 'libggobi', not found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. Alternatively, you may set the environment variables GGOBI_CFLAGS and GGOBI_LIBS to avoid the need to call pkg-config. See the pkg-config man page for more details. Mark, The first thing I would look at is whether there are any *-dev packages in synaptic for the libraries etc that are 'missing'. These -dev packages contain the header files and are not necessary for running the application, but are necessary for installing other apps from source that interact with them. This is a surprisingly little-advertised issue with Linux packaging that I found out about from the R installation manual. Michael Bibo __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
