That is a separate bug in gnome-menus that should be fixed in gutsy.
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Alacarte doesn't update its display when you check boxes or add applications
https://bugs.launchpad.net/bugs/76307
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I got this issue with Alacarte 0.11.3-0ubuntu2.
1) I installed 'lyx' from local DVD (repositories) using synaptic.
2) It didn't show up in the Office menu entry (Applications-> Office).
Not there.
3) Yet it was there when you "Edit menus" (alacarte).
4) To make it show up I had to untick it fro
** Changed in: alacarte (Ubuntu)
Status: Needs Info => Fix Released
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Alacarte doesn't update its display when you check boxes or add applications
https://launchpad.net/bugs/76307
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Please try again with the 0.11.0 (or later) version in feisty.
** Changed in: alacarte (Ubuntu)
Assignee: (unassigned) => Travis Watkins
Status: Unconfirmed => Needs Info
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Alacarte doesn't update its display when you check boxes or add applications
https://launchpad.net/bugs/76307