[Freesurfer] T2 vs. T2-FLAIR update

Hello, I am beginning a new study and would like to determine the optimal T2 acquisition parameters for improved pial surface results from FreeSurfer. I am wondering if there is a difference in using a T2 or T2-FLAIR. I have found a discussion post from 2014 which provided useful information

[Freesurfer] TRACULA: Could not find satisfactory control point fit - try 20786

Hi Anastasia, I have been having difficulty running the trac-all -prep command on one subject (all of my other subjects have been fine), and it appears that the process gets stuck once processing for pathway 8 begins, and cannot find satisfactory control points. However, I was out of town and

Re: [Freesurfer] TRACULA: drmirc parameteres with already processed and registered data

Hello, I am interested in using TRACULA for my data, but I have a few questions about modifying the dmrirc configuration file. I have already conducted eddycorrect, bet, and dtifit in FSL, registration of T1 and dti using ANTs, and I have also registered individual subject data to a templat

[Freesurfer] TRACULA: drmirc parameteres with already processed and registered data

Hello, I am interested in using TRACULA for my data, but I have a few questions about modifying the dmrirc configuration file. I have already conducted eddycorrect, bet, and dtifit in FSL, registration of T1 and dti using ANTs, and I have also registered individual subject data to a template