Peter and Daniel, thanks for the comments.
On 19/10/11 23:49, Peter Cock wrote:
On Wed, Oct 19, 2011 at 2:31 PM, Daniel Blankenberg wrote:
Hi Florent,
Sorry for the delay. I did try the patch out shortly after you contributed
it, but it caused the functional to fail. I was able to fix the is
Hi Galaxy,
I am trying to stitch together MAF alignments for the coding sequence
for a few genes of interest in Drosophila. I used UCSC to send the bed
intervals of the coding exons of my gene and sent the output to
Galaxy. But when I try and use the tool "Stitch Gene blocks" it
complains that my
Hi,
When I installed galaxy, one error message appeared, which said that
ImportError: No module named distutils.util
Fetch failed.
Could you tell me how to solve this problem?
Thank you very much!
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The Galaxy User list should be used for
On Wed, Oct 19, 2011 at 2:31 PM, Daniel Blankenberg wrote:
> Hi Florent,
> Sorry for the delay. I did try the patch out shortly after you contributed
> it, but it caused the functional to fail. I was able to fix the issue and
> allow the existing tests to start passing, but I've been bogged down
Hello,
Use "Get Data -> Upload" or load your data into Galaxy with FTP (if large):
http://galaxyproject.org/wiki/Learn/Upload%20via%20FTP
Once the data is in Galaxy, this tutorial covers the general analysis
path for RNA-seq data:
http://main.g2.bx.psu.edu/u/jeremy/p/galaxy-rna-seq-analysis-ex
Hi Florent,
Sorry for the delay. I did try the patch out shortly after you contributed it,
but it caused the functional to fail. I was able to fix the issue and allow
the existing tests to start passing, but I've been bogged down lately and
haven't been able to perform a more thorough review
On Wed, Oct 19, 2011 at 4:53 AM, Florent Angly wrote:
>
> I have had the chance to try the patch on several datasets and it looks good
> :)
> I reiterate my suggestion to pull the patch in galaxy-central.
> Best,
> Florent
It looks sensible, although I would add a comment to the join method
to sa
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