[PyMOL] "unset" surface colors

2006-05-24 Thread Natasja Brooijmans
I accidently used the "set surface_color, x" command, and then unset. Now the full surface is colored white. Rather, I want the surface to be colored by the color of the underlying residues, but it looks like I can't get it to do that after having used the set command. Any way of resetting the s

Re: [PyMOL] "unset" surface colors

2006-05-24 Thread Tsjerk Wassenaar
Hi Natasja, That should be done with (IIRC) set surface_color,-1 Tsjerk On 5/24/06, Natasja Brooijmans wrote: I accidently used the "set surface_color, x" command, and then unset. Now the full surface is colored white. Rather, I want the surface to be colored by the color of the underlying

Re: [PyMOL] loosen secondary structure

2006-05-24 Thread Robert Campbell
Hi, * O. J. Ganesh [2006-05-18 16:09] wrote: > > Hey PyMOL gurus: > > I have a 'perfect' helix. Is there some way to 'loosen' all of the > angles in the helix so instead of 3.6 residues per turn, I could > have, say, 8 residues per turn. My goal is to make the helix more > 'coil-like'. Is thi

[PyMOL] Mysterious crash bug

2006-05-24 Thread Jacob Corn
Hi everyone, On a few structures (some partially-built) I have run into an odd barely-reproducible crash bug with PyMOL 0.99rc6 (once on windows and once on linux). When a "problem" molecule is loaded (sometimes this is a specific combination of molecules, and not a single molecule), mousing-ov