Introducing myself

2004-02-26 Thread Nandini Devi Radhamonyamma
Hi All, This is just to introduce myself to the members of the mailing list. My name is Nandini Devi Radhamonyamma and I am currently working in St. Andrews University, Scotland with Dr. Paul Wright. I am relatively new to structure solution from powder data and hope to get all the help I can to g

Bragg R and GSAS

2004-02-26 Thread Nandini Devi Radhamonyamma
Hi All, How important is Rbragg in powder data structure solution? Does GSAS suit give this parameter? __ Do you Yahoo!? Get better spam protection with Yahoo! Mail. http://antispam.yahoo.com/tools

RE: RE: Re: thermal parameters at low temperature

2004-02-26 Thread Kurt Leinenweber
Title: RE: Re: thermal parameters at low temperature ï Liliana,   OK, they should vibrate less... but are they good neutron scatterers or poor?  If they are poorly scattering, the thermal factors won't be as meaningful.       - Kurt   ---Kurt LeinenweberDepartment

Re: Bragg R and GSAS

2004-02-26 Thread Nandini Devi Radhamonyamma
Thank you. In parallel with single crystal analysis, is there an accepted limit for R(F2) or any other parameter like Rexp to follow? I'm using synchrotron data. nandini --- "Von Dreele, Robert B." <[EMAIL PROTECTED]> wrote: > Nandini, > GSAS gives R(F^2) which is sometimes defined for > single c

RE: Re: thermal parameters at low temperature

2004-02-26 Thread Von Dreele, Robert B.
Liliana, GSAS will refine the value of the absorption coefficient for neutron TOF data quite easily (I recall one message of yours mentioned that your data was of this "flavor"). Just turn on the flag. Your Uiso's should rise for all atoms making those for the heavy atoms positive. The ABS value

thermal parameters at low temperature

2004-02-26 Thread Marilena L Viciu
Dear all,   I am refining a powder neutron data at low temperature (50K). I got some of the thermal parameters negative although the model seems to be quite right (the data at room temperature behaved well with the same model). From your experience, is this the case of a wrong model?   I reall

RE: RE: Re: thermal parameters at low temperature

2004-02-26 Thread Marilena L Viciu
Dear Dr Von Dreele, The structure at room temperature was refined from neutron TOF. Now, I am using this model to refine low temperature data from neutron CW. My sample has Cu-Cl-La-Nb-O. Sincerely, Liliana -Original Message-

RE: RE: Re: thermal parameters at low temperature

2004-02-26 Thread Markus Valkeapää
> ... the path of > setting the absorption correction. > In expedt (after choosing the file): L, O, A, C In EXPGUI: input window is behind "Globally Edit Absorption" buttom in the Histogram panel. Best Regards, Markus -- Markus Valkeapää, [EMAIL PROTECTED] Inorganic Chemistry, Göteborg Univer

Re: thermal parameters at low temperature

2004-02-26 Thread Andreas Leineweber
Dear Liliana, if the model is correct, and variable site occupancies can be excluded and the chosen scattering lengths are correect, it is likely that some 2theta-dependent or time-flight-dependent (if time of flight diffractometer was used) effects (e.g. absorption, Lorentz factors) are not corr

Re: Bragg R and GSAS

2004-02-26 Thread Von Dreele, Robert B.
Nandini, I suggest you look at the paper "Rietveld refinement guidelines", J. Appl. Cryst. (1999) 32, 36-50. Bob Von Dreele -Original Message- From: Nandini Devi Radhamonyamma [mailto:[EMAIL PROTECTED] Sent: Thu 2/26/2004 8:38 AM To: [EMAIL PROTECTED] Thank you. In parallel with single

Single crystal data setup

2004-02-26 Thread Jennifer Anderson
Hello, Can I insert a single crystal data set into GSAS for a refinement without having to reduce the data? Can I start the refinement from the hkl intensity data file (ASCII), without entering the intrument specifics? ie orientation angles, attenuation and wavelength? My data set has al

Re: thermal parameters at low temperature

2004-02-26 Thread Maxim V. Lobanov
Dear Liliana, To guess what could be a possible answer one would probably need a little more information. Is the RT dataset collected with the same instrument and setup? Is it constant-wavelength of TOF? Do you have any magnetic contribution at 50K, and how do you treat it? Sincerely,

Re: Bragg R and GSAS

2004-02-26 Thread Jon Wright
In comparing refinements with different powder datasets there is no "number of observations" in common usage and no 10:1 rule of thumb. Broadly, this means "crappy" data with a chemically unreasonable model can sometimes give much better figures of merit than a good structure with "good" data.

Re: Bragg R and GSAS

2004-02-26 Thread Kurt Leinenweber
I tend to use bond lengths to check refinements. If bond lengths - and thermal parameters too - aren't physically reasonable, it can mean that the structure is correct but the refinement is bad, that the structure is somehow wrong, or the atom assignments are wrong. Bond-valence sums are great fo

RE: Re: thermal parameters at low temperature

2004-02-26 Thread Maxim V. Lobanov
>Sorry for the ambiguous information I gave previously. The data at >room temperature were taken with a variable wavelength (TOF) whether >at low temperature the data were recorded with constant wavelength. >There is no magnetic contribution on the pattern. The negative thermal >parameters are for

Single crystal data setup

2004-02-26 Thread Von Dreele, Robert B.
Jennifer, Yes. Start with SXTLDATA to read in the hkl file. It will ask for lots of stuff but you will only really need h,k,l,Fo & sig(Fo). Then go to EXPEDT to put in the rest of the stuff (atom positions, etc.). Bob Von Dreele -Original Message- From: Jennifer Anderson [mailto:[EMAIL

RE: Re: thermal parameters at low temperature

2004-02-26 Thread Von Dreele, Robert B.
Liliana, You can calculate the absorption coefficient for your CW neutron experiment. GSAS wants mu*R/lambda. Find a table of "true" neutron absorption cross sections for your elements & calculate mu from them in cm-1. R is the radius of your sample can in cm. Divide by 2 to correct for packing

Re: thermal parameters at low temperature

2004-02-26 Thread Andreas Leineweber
Dear Liliana, of course the remarks of Maxim are correct, the experimental conditions are very important. Just additionally: Very important is also the range of d* which is covered experimentally for the accuracy of the displacement parameters. Of importance is also the mass of the atom. Heavy a

RE: Re: thermal parameters at low temperature

2004-02-26 Thread Kurt Leinenweber
Wait! I have to mention - the "heaviness" of atoms (atomic number Z) is important in x-ray diffraction, but is uncorrelated with the neutron scattering factor for the nuclei. When you say heavy, do you mean the highly scattering ones for neutrons, or the high-Z ones? - Ku

RE: RE: Re: thermal parameters at low temperature

2004-02-26 Thread Marilena L Viciu
Kurt, I mean heavy in the atomic number. Liliana -Original Message- From: Kurt Leinenweber [mailto:[EMAIL PROTECTED] Sent: Thu 2/26/2004 2:21 PM To: [EMAIL PROTECTED] Cc: Subject: RE: Re: thermal parameters at low temperature

RE: RE: Re: thermal parameters at low temperature

2004-02-26 Thread Marilena L Viciu
Maxim, I looked quickly in GSAS manual and I colud not find the path of setting the absorption correction. Do you know the way of fixing these terms, or is there anybody out there willing to tell me the way of doing it? Thank you very much, Liliana -Original Message-

Re: thermal parameters at low temperature

2004-02-26 Thread Maxim V. Lobanov
In EXPGUI it is in the "Histogram" panel. Or, in "Expedt" go to l - o(overall)-a(absorption). Choose function number 0 (Debye-Scherrer)... > >I looked quickly in GSAS manual and I colud not find the path of >setting the absorption correction. Do you know the way of fixing these >terms, or is ther

Re: Bragg R and GSAS

2004-02-26 Thread Alan Hewat
At 16:28 26/02/2004, Jon Wright wrote: >Broadly, this means "crappy" data with a chemically unreasonable model can sometimes >give much better figures of merit than a good structure with "good" data. True, with enough parameters you can fit an elephant, but the calculated errors in your structur

RE: Re: thermal parameters at low temperature

2004-02-26 Thread Marilena L Viciu
Sorry for the ambiguous information I gave previously. The data at room temperature were taken with a variable wavelength (TOF) whether at low temperature the data were recorded with constant wavelength. There is no magnetic contribution on the pattern. The negative thermal parameters are for the h

Bragg R and GSAS

2004-02-26 Thread Von Dreele, Robert B.
Nandini, GSAS gives R(F^2) which is sometimes defined for single crystal structure analysis. It can be used in the same way as RBragg. Neither is statistically related to the minimization process in a Rietveld least squares refinement, but can be a useful diagnostic for the quality of the struct